DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2116 and hic2

DIOPT Version :9

Sequence 1:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster
Sequence 2:XP_002931932.1 Gene:hic2 / 100491988 XenbaseID:XB-GENE-960044 Length:543 Species:Xenopus tropicalis


Alignment Length:498 Identity:104/498 - (20%)
Similarity:170/498 - (34%) Gaps:113/498 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EVIEFVLPANSDYSDEDNRGNVRVINTSDDATYVLLDNL-----------GNEFEEDIIIVNENG 63
            ::::|:.......||:....|...:.|:  |:|:.|.:|           |..|      :.:.|
 Frog    73 QILDFIYTGKLLTSDQPGEQNFNALLTA--ASYLQLHDLAALCRKKLKRAGKPF------IGKLG 129

  Fly    64 VEKEMLMSKELRDFIVGSRVKDLTDDEQMPQFVVRELDMSEV-GDLVEVEPEMEQEADYGDYGDY 127
            |.....:.:.|.......|.....|..::.|  .:||  |:| |...||....:||..:......
 Frog   130 VPSIGRVGRRLSAPFGHMRYSGSPDGGKLSQ--TKEL--SKVTGPEDEVFAASKQENCHSLNRGT 190

  Fly   128 EHEPSYGHPRDNERVEEDLDMYPPSSPSLP------PSPPRPPSPVVQPASKA-----------R 175
            ....|..:..:....|..||: ...|||||      .:..|..||....||.|           :
 Frog   191 SSNSSLNNSTNGSDQELGLDL-SKKSPSLPVQDDALQADSRAGSPQSASASVANSASYEDLDLQK 254

  Fly   176 NSARQIALRSFVSQKNNDD-------------------------DDGSVKEVKPSEKMLEEFKGP 215
            |:...:.|.:  .::||.|                         :||.  |..|:..::......
 Frog   255 NNCEPMELEA--GEENNSDIGPKKLHRHASRKKEWMRIEGDKCAEDGG--ETMPNGVIVGPLSKE 315

  Fly   216 RRYMLFDDLIATIVDFDEDSTPLVEFSMISDIMDEKLPVECGICPDVMHKSKLSKHHKTHLVP-G 279
            |.       :..|...:::.....|.....|..||....| ..|....:.:.:.:......|| |
 Frog   316 RN-------LGGIYGSEQNFQCKDEIENGKDNSDESGHSE-SECSGHQNANYIYRQEGFETVPFG 372

  Fly   280 TNRYACIYCTETYRDCKYLAGHARRHM-----------------------------GIRPYVCEL 315
            .|.|.||.|.:.:.:.:.|..|...|.                             ..||:.|.:
 Frog   373 DNLYVCIPCGKGFPNSEQLNAHVETHTEEELYIKEEDSYSKEEAEDLSTPNAAFPNEPRPFKCSV 437

  Fly   316 CTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQCEYCQKAYYKN 380
            |...:.....||.|.:...|.:...|.:|||.|.|...:.||.. :|...:.|.||.|...:.:.
 Frog   438 CERSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMR-SHLGLKPFACEECGMRFTRQ 501

  Fly   381 FSLQEHIRNVHMGKRRMLKCPFCGMQCRDAHKMARHRKEMHLS 423
            :.|.||:| ||.|: :..:|..||.:......:..|.: ||.|
 Frog   502 YRLTEHMR-VHSGE-KPYECQLCGGKFTQQRNLISHLR-MHTS 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 1/18 (6%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 14/48 (29%)
C2H2 Zn finger 313..334 CDD:275368 5/20 (25%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
C2H2 Zn finger 370..388 CDD:275368 6/17 (35%)
C2H2 Zn finger 400..418 CDD:275370 4/17 (24%)
C2H2 Zn finger 429..447 CDD:275368
hic2XP_002931932.1 BTB_POZ_ZBTB30_HIC2 3..122 CDD:349643 9/50 (18%)
zf-C2H2_3rep <375..479 CDD:376287 21/103 (20%)
C2H2 Zn finger 378..398 CDD:275368 5/19 (26%)
C2H2 Zn finger 435..455 CDD:275368 5/19 (26%)
zf-C2H2 461..483 CDD:333835 8/22 (36%)
C2H2 Zn finger 463..483 CDD:275368 8/20 (40%)
zf-H2C2_2 476..500 CDD:372612 7/24 (29%)
C2H2 Zn finger 491..511 CDD:275368 7/20 (35%)
zf-H2C2_2 503..528 CDD:372612 10/26 (38%)
C2H2 Zn finger 519..539 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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