DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cyr and pio

DIOPT Version :9

Sequence 1:NP_001285004.1 Gene:cyr / 31733 FlyBaseID:FBgn0030001 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster


Alignment Length:485 Identity:111/485 - (22%)
Similarity:188/485 - (38%) Gaps:77/485 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AIGVLHLPQFLCHAA---WTTRTPESFINDTTTTTTTTTTTTTKTMQIQAMQVNCSRELLEMHLE 85
            |:.::.:.....|||   ...:..:|.::|..........:|:|.....::::.|....:.:.::
  Fly    13 ALHLITIAALTTHAAQIPTAMKDAQSSLSDAIAAAEAEVASTSKPAVEPSVRIKCLSGSMLITIK 77

  Fly    86 LSRP------FRGLLYAKDFPLE--CRARGKDST-RLHLRIPTSGCGVRAEPLEDGSLEYTVRVM 141
            .:.|      |.|::|.|.....  |.:..:|.. .|..::|...|....:..:||.:|:...::
  Fly    78 DAPPNHETGLFSGMIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRSCNTMPKETDDGGIEFFNTIV 142

  Fly   142 LQKEQKLRQSTDILSS--VRCQLPANAMGM-PLPVLRQE-------KGHDRNARMRALAAAA--- 193
            ||...||  .||:...  |||...:....| |...||:.       :..||....|:|....   
  Fly   143 LQPHLKL--ITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDD 205

  Fly   194 -----AVPALGATSSINQQQRETPRVRIWLELGGPNG--TGSVEVGVATTLTVRAIVPGNIGVRV 251
                 ...|...|...:....|.|.....:::.....  ...|::|...|:.:........|:.|
  Fly   206 LDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHKIADDVKIGDPLTIVISIDKQKVYGLHV 270

  Fly   252 VDCAALDGLGESTQQLLDARGCPIDEQVMPAL-HTQHRPAEEGWSKQHEEDLVERTFAATFPAFK 315
            .||...||||...|:|:...|||:|.::|... :||.|.|..                .||||.|
  Fly   271 TDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTQDRLAAN----------------VTFPAHK 319

  Fly   316 FPDRERLHVSCGVQLCKGKCPTL----NCRLKTPPPALSAEQH-----LARIEVFNSLAVTAPQI 371
            ||....::..|.|:||..:.||.    .|..|.|....:|:..     .|.||||:.|.|     
  Fly   320 FPYTTSVYYQCNVRLCALEDPTCQEAPQCSGKRPKRQAAADSKEEDGLPATIEVFSGLYV----- 379

  Fly   372 EVDRLRYDRRHNMSGEDYAPHVRGQVMPGEGTLCLSISKLAISFCVLGLIFLVAVVVAIFSLIRS 436
                   :...|.:..|.....:.:.:  :..||:|....||:..:.|||.::|||.|:..::..
  Fly   380 -------NENENANDSDEDAVYKEKTL--DDALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMAR 435

  Fly   437 RRRERRHGAGLSLGLGVGLGIAGTSTSNSS 466
            |..:....:|.|:..|   ....|:.|:||
  Fly   436 RSTKTVSNSGSSIYSG---PYTNTAFSHSS 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cyrNP_001285004.1 ZP 82..344 CDD:214579 70/295 (24%)
pioNP_001163295.1 ZP 66..349 CDD:214579 70/300 (23%)
Zona_pellucida <248..349 CDD:278526 35/116 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473242
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28MB9
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016793
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.740

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