DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2260 and WDR46

DIOPT Version :10

Sequence 1:NP_572441.1 Gene:CG2260 / 31732 FlyBaseID:FBgn0030000 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_054187169.1 Gene:WDR46 / 9277 HGNCID:13923 Length:754 Species:Homo sapiens


Alignment Length:593 Identity:240/593 - (40%)
Similarity:341/593 - (57%) Gaps:62/593 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VTPKG---RPKAKTPYKRYFD----------------GQKDTETGDGDLKHVKVFSKNRQNFTGD 49
            |.||.   :.|.|.| :||::                .:|:.|......|:..:..|:|      
Human    11 VPPKKDKLQTKRKKP-RRYWEEETVPTTAGASPGPPRNKKNRELRPQRPKNAYILKKSR------ 68

  Fly    50 FISMINK----TKKPRPQKAP--AKPTKEELEARPKKNPIPKEILDKYSRGEQVQPKGVKTRHFK 108
                |:|    .||||..|.|  .:......:..|...|:|.|::.|:.|.:    |..|..|.|
Human    69 ----ISKKPQVPKKPREWKNPESQRGLSGAQDPFPGPAPVPVEVVQKFCRID----KSRKLPHSK 125

  Fly   109 EQQTRKEVYLEYATEQ-----AARTELLLQETAGQLQADEGETTAEFRQSQIAENVDIQSSAKHF 168
             .:||..:.:..|.|:     |||:||||.|..|.|:.::||.||:..|:.|.|.|||.|:||||
Human   126 -AKTRSRLEVAEAEEEETSIKAARSELLLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHF 189

  Fly   169 NLNM-EFGPYRMRYTKNGRHLLLGGKRGHVAAFDWVTKRLHCEFNAMESVEDVQWLHVPTMYAVA 232
            :||: :|||||:.|::.||||..||:||||||.|||||:|.||.|.||:|.|:::||...:.|||
Human   190 DLNLRQFGPYRLNYSRTGRHLAFGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSEALLAVA 254

  Fly   233 QKSWVYFYDKKGTELHCIKRLNRVNRLDFLPYHFLLAAGNSAGYASWLDVSIGELVGNFNTGLGD 297
            |..|::.||.:|.|||||:|.:||.||:|||:|||||..:..|:.::||||:|::|...|...|.
Human   255 QNRWLHIYDNQGIELHCIRRCDRVTRLEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGR 319

  Fly   298 IRMLRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCHSTAMSALAVEPKGQYLVTAGLDRAVK 362
            :.::..||.|.|:.:|...|..|:|||.::|||||:|||...:.|:||:..|.|:.|:|||..:|
Human   320 LDVMSQNPYNAVIHLGHSNGTASLWSPAMKEPLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLK 384

  Fly   363 VWDIRMLVHDKPLTHFQLRLPANELDVSQRGMLALSQGTYLETYSDLLSGGGSGDGTRLPYIRQR 427
            ::|:|...  :||:...|...|..|..||||:|....|..:..::.  .|..|......||:..|
Human   385 IFDLRGTY--QPLSTRTLPHGAGHLAFSQRGLLVAGMGDVVNIWAG--QGKASPPSLEQPYLTHR 445

  Fly   428 CDAFVHGLRFCPYEDVLGVSTAKGFQSLLVPGSGEPNFDAMEDNPYETSKQRREHEVHALLEKIP 492
            ....||||:|||:||||||....|..|:||||:||||||.:|.|||.:.|||:|.||.|||||:|
Human   446 LSGPVHGLQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPYRSRKQRQEWEVKALLEKVP 510

  Fly   493 PELITLDPQEITGVDAPTLQEKIDAKRKLFHL------KAPRINMKSRHKMKGRGGTAKAARNKQ 551
            .|||.|||:.:..||..:|::  ..|.::..|      |||   .:.:.|.|||..||...:.|:
Human   511 AELICLDPRALAEVDVISLEQ--GKKEQIERLGYDPQAKAP---FQPKPKQKGRSSTASLVKRKR 570

  Fly   552 IVKDAKRK 559
            .|.|.:.:
Human   571 KVMDEEHR 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2260NP_572441.1 WD40 <177..367 CDD:441893 94/189 (50%)
WD40 repeat 181..210 CDD:293791 19/28 (68%)
WD40 repeat 218..253 CDD:293791 16/34 (47%)
WD40 repeat 256..292 CDD:293791 18/35 (51%)
WD40 repeat 299..334 CDD:293791 15/34 (44%)
WD40 repeat 340..376 CDD:293791 13/35 (37%)
BING4CT 422..500 CDD:198101 48/77 (62%)
WDR46XP_054187169.1 PTZ00449 <4..>124 CDD:185628 29/127 (23%)
WD40 <181..390 CDD:441893 106/208 (51%)
WD40 repeat 199..235 CDD:293791 23/35 (66%)
WD40 repeat 240..274 CDD:293791 16/33 (48%)
WD40 repeat 278..314 CDD:293791 18/35 (51%)
WD40 repeat 323..356 CDD:293791 15/32 (47%)
WD40 repeat 362..399 CDD:293791 14/38 (37%)
WD40 repeat 407..443 CDD:293791 11/37 (30%)
BING4CT 440..517 CDD:462375 47/76 (62%)

Return to query results.
Submit another query.