DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2260 and SPAC959.03c

DIOPT Version :9

Sequence 1:NP_572441.1 Gene:CG2260 / 31732 FlyBaseID:FBgn0030000 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_594170.1 Gene:SPAC959.03c / 2543484 PomBaseID:SPAC959.03c Length:520 Species:Schizosaccharomyces pombe


Alignment Length:546 Identity:211/546 - (38%)
Similarity:305/546 - (55%) Gaps:50/546 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EELEARPKKNPIPKEILDKYSRGEQVQPKGVKTRHFKEQQTRKEVYLEYATEQAARTELLLQETA 136
            |::.|..|          |||||.::.||.:|.:..:....:.|..:|......|:||:|.::..
pombe     9 EDVNASTK----------KYSRGRKLNPKKIKDKKLRSNIQKIEERIENVESSLAKTEILHEDNP 63

  Fly   137 GQLQADEGETTAEFRQSQIAENVDIQSSAKHFNLNME-FGPYRMRYTKNGRHLLLGGKRGHVAAF 200
            |.|:|:..|.|.:|||.|:|.||.::::.|.|:|::: ||.|...||::||.:||||::||::||
pombe    64 GLLEAEGLERTYKFRQDQLAPNVALETATKSFSLDLDKFGGYSFDYTRDGRMILLGGRKGHISAF 128

  Fly   201 DWVTKRLHCEFNAMESVEDVQWLHVPTMYAVAQKSWVYFYDKKGTELHCIKRLNRVNRLDFLPYH 265
            ||.|.:|..|.:..|:|.||:|.|....:|||||.:||.||..|||:||:||...||.|||||||
pombe   129 DWRTGKLLTELHLRETVRDVKWFHNHQYFAVAQKKYVYVYDNMGTEIHCLKRHIEVNALDFLPYH 193

  Fly   266 FLLAAGNSAGYASWLDVSIGELVGNFNTGLGDIRMLRHNPRNGVLCIGGGRGVVSMWSPKVREPL 330
            .||.:..:|||..:.|||.|:||....||:|...:|..||.|.|..:|...|.|::|||....||
pombe   194 LLLTSIGNAGYLKYQDVSTGQLVAEHRTGMGASHVLHQNPHNAVEHVGHANGQVTLWSPSSTTPL 258

  Fly   331 AKLLCHSTAMSALAVEPKGQYLVTAGLDRAVKVWDIRMLVHDKPLTHFQLRLPANELDVSQRGML 395
            .|:|.|...:..|||...|:|:||||.|..:||||:|..   |.|..:....||..|.:|.||:|
pombe   259 VKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDLRTY---KELHSYYTPTPAQRLTLSDRGLL 320

  Fly   396 ALSQGTYLETYSDLLSGGGSGDGTRLPYIRQRC-DAFVHGLRFCPYEDVLGVSTAKGFQSLLVPG 459
            |:..|.:...:.|.|.     .....||:.... .:.|..|.:|||||:||:..||||:|::|||
pombe   321 AVGWGPHATIWKDALR-----TKQNFPYMNHLLPSSSVVDLHYCPYEDILGIGHAKGFESIIVPG 380

  Fly   460 SGEPNFDAMEDNPYETSKQRREHEVHALLEKIPPELITLDPQEITGVD--APTLQEKIDAKRKLF 522
            |||||:|:.|::|:.:.|||:|.||..||||:.||:|:|:...|..||  ||:|: |.:|:.:  
pombe   381 SGEPNYDSYENDPFASRKQRQETEVRQLLEKLRPEMISLNADFIGNVDRAAPSLR-KAEAEEE-- 442

  Fly   523 HLKAPRINMKSRHKMKGRGGT-----AKAARNKQIVKDAKRKEFIAEVREAKKNVIKQHTADEVG 582
              |.|......:.|.:|:...     .|.|||   |.|.:|.:.     |....:.|:..|..| 
pombe   443 --KPPEEKWVPKAKARGKNSALRRYLRKHARN---VVDQRRLKV-----EKSLEIEKKMRAQRV- 496

  Fly   583 AKGKAKTKAPRS------VLDRFKPK 602
               :.:.|.|..      .|.||..|
pombe   497 ---RREQKLPEEREKWGYALSRFVSK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2260NP_572441.1 WD40 177..398 CDD:295369 104/220 (47%)
WD40 <181..371 CDD:225201 93/189 (49%)
WD40 repeat 181..210 CDD:293791 16/28 (57%)
WD40 repeat 218..253 CDD:293791 19/34 (56%)
WD40 repeat 256..292 CDD:293791 20/35 (57%)
WD40 repeat 299..334 CDD:293791 14/34 (41%)
WD40 repeat 340..376 CDD:293791 16/35 (46%)
BING4CT 422..500 CDD:198101 41/78 (53%)
SPAC959.03cNP_594170.1 WD40 105..>303 CDD:295369 96/200 (48%)
WD40 repeat 105..138 CDD:293791 17/32 (53%)
WD40 <110..376 CDD:225201 120/273 (44%)
WD40 repeat 146..182 CDD:293791 20/35 (57%)
WD40 repeat 184..217 CDD:293791 19/32 (59%)
WD40 repeat 225..263 CDD:293791 14/37 (38%)
WD40 repeat 268..303 CDD:293791 17/37 (46%)
BING4CT 342..420 CDD:285375 40/77 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 224 1.000 Domainoid score I534
eggNOG 1 0.900 - - E1_KOG1272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3981
Inparanoid 1 1.050 356 1.000 Inparanoid score I473
OMA 1 1.010 - - QHG55311
OrthoFinder 1 1.000 - - FOG0005051
OrthoInspector 1 1.000 - - oto100847
orthoMCL 1 0.900 - - OOG6_102360
Panther 1 1.100 - - LDO PTHR14085
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1624
SonicParanoid 1 1.000 - - X3576
TreeFam 1 0.960 - -
1413.860

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