DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2260 and wdr-46

DIOPT Version :9

Sequence 1:NP_572441.1 Gene:CG2260 / 31732 FlyBaseID:FBgn0030000 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_502358.1 Gene:wdr-46 / 178185 WormBaseID:WBGene00009211 Length:580 Species:Caenorhabditis elegans


Alignment Length:605 Identity:221/605 - (36%)
Similarity:331/605 - (54%) Gaps:51/605 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TKVTPKGRPKAKTPYKRYFDGQKDTETGDGDLKHVKVFSKNRQNFTGDFISMINKTKKPRPQKAP 66
            |.|||....:.|..:|.|  .:....||.|....:|                    ||.||    
 Worm    21 TDVTPAKGVEEKMSWKEY--KKMKQHTGGGTRNKLK--------------------KKQRP---- 59

  Fly    67 AKPTKEELEARPKK-NPIPKEILDKYSRG-EQVQPKGVKTRHFKEQQTRKEVYLEYATEQAARTE 129
              || |..|.|.|| ..:.||.|:::..| :|:.|..::::..:|:....:...:...|..|:.|
 Worm    60 --PT-ENTEGRAKKPKVLTKEQLERHDTGADQIDPSSMRSKLQQEKMKVTKDKFQRRIEATAKAE 121

  Fly   130 LLLQETAGQLQADEGE--TTAEFRQSQIAENVDIQSSAKHFNLNM-EFGPYRMRYTKNGRHLLLG 191
            ..|.|..|.:..||.:  .|...||..|||:||:.::.|||.|.: .||||.:.||.|||||::|
 Worm   122 KRLVENTGFVAPDEEDHSLTYSIRQKDIAESVDLAAATKHFELKLPRFGPYHIDYTDNGRHLVIG 186

  Fly   192 GKRGHVAAFDWVTKRLHCEFNAMESVEDVQWLHVPTMYAVAQKSWVYFYDKKGTELHCIKRLNRV 256
            |::||:||.||.||.||.|.:.||.|.||::||.....|||||::.|.||..||||||:|.:...
 Worm   187 GRKGHLAALDWQTKHLHFEQSVMEKVSDVKFLHTENFIAVAQKNYTYVYDNLGTELHCLKTMYDT 251

  Fly   257 NRLDFLPYHFLLAAGNSAGYASWLDVSIGELVGNFNTGLGDIRMLRHNPRNGVLCIGGGRGVVSM 321
            .||:|||:||||...:...:.:::|||:|:.|.:|.|..|.:.::..||.|.::..|...|.||:
 Worm   252 ARLEFLPHHFLLVGSSRNSFLNYVDVSVGKQVASFATKSGTLDVMCQNPANAIIHTGHTNGTVSL 316

  Fly   322 WSPKVREPLAKLLCHSTAMSALAVEPKGQYLVTAGLDRAVKVWDIRMLVHDKPLTHFQLRLPANE 386
            |||..:|||.|:|.|.:|:..:||:.:|.|:.|.||||..::||:||.   :.|..:.|....:.
 Worm   317 WSPNSKEPLVKILTHLSAVKGIAVDDQGNYMATTGLDRKCRIWDVRMF---RQLHAYSLPFGVSN 378

  Fly   387 LDVSQRGMLALSQGTYLETYSDLLSGGGSGDGT-RLPYIRQRCDAFVHGLRFCPYEDVLGVSTAK 450
            :.:||:..:|.:.|.:::.:.      |..:|| :.||:...|...|..|||.|:|||||:..|.
 Worm   379 VAISQKMNVACAVGNHVQVFR------GMHNGTCKEPYLVHNCGGVVTDLRFVPWEDVLGIGHAG 437

  Fly   451 GFQSLLVPGSGEPNFDAMEDNPYETSKQRREHEVHALLEKIPPELITLDPQEITGVDAPTLQEKI 515
            ||.|:||||:|:||.|.:..|||||..||:|.|:..||:||.||||:|:|.:|..|:...|:.:.
 Worm   438 GFTSMLVPGAGDPNVDTLRSNPYETKSQRKEREIKQLLDKIQPELISLNPDDINKVNEGLLELEE 502

  Fly   516 DAKRKLFHLKAPRINMKSRHKMKGRGGTAKAARNKQIVKDAKRKEFIAEVREAKKNVIKQHTADE 580
            :.::|:.:::...:....||||:.:....|....|.||||..|.|...|....:|.|.:....|:
 Worm   503 EERKKILYIRPMAVQYTPRHKMRSKKSGWKMEARKNIVKDQIRMERNMEKHAVEKEVFEAPEVDD 567

  Fly   581 VGAKGKAKTKAPRSVLDRFK 600
            ...|.|       .:|||.|
 Worm   568 EAPKKK-------HILDRLK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2260NP_572441.1 WD40 177..398 CDD:295369 95/220 (43%)
WD40 <181..371 CDD:225201 89/189 (47%)
WD40 repeat 181..210 CDD:293791 19/28 (68%)
WD40 repeat 218..253 CDD:293791 19/34 (56%)
WD40 repeat 256..292 CDD:293791 14/35 (40%)
WD40 repeat 299..334 CDD:293791 14/34 (41%)
WD40 repeat 340..376 CDD:293791 13/35 (37%)
BING4CT 422..500 CDD:198101 43/77 (56%)
wdr-46NP_502358.1 WD40 161..426 CDD:392136 112/273 (41%)
WD40 repeat 213..250 CDD:293791 19/36 (53%)
WD40 repeat 253..286 CDD:293791 14/32 (44%)
WD40 repeat 293..330 CDD:293791 14/36 (39%)
WD40 repeat 335..371 CDD:293791 14/38 (37%)
WD40 repeat 376..412 CDD:293791 9/41 (22%)
BING4CT 409..487 CDD:198101 43/77 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166996
Domainoid 1 1.000 214 1.000 Domainoid score I1588
eggNOG 1 0.900 - - E1_KOG1272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3981
Inparanoid 1 1.050 384 1.000 Inparanoid score I1170
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55311
OrthoDB 1 1.010 - - D222308at33208
OrthoFinder 1 1.000 - - FOG0005051
OrthoInspector 1 1.000 - - oto19114
orthoMCL 1 0.900 - - OOG6_102360
Panther 1 1.100 - - LDO PTHR14085
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1624
SonicParanoid 1 1.000 - - X3576
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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