DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2258 and LDB17

DIOPT Version :9

Sequence 1:NP_001285000.1 Gene:CG2258 / 31729 FlyBaseID:FBgn0029997 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_010135.1 Gene:LDB17 / 851409 SGDID:S000002305 Length:491 Species:Saccharomyces cerevisiae


Alignment Length:417 Identity:91/417 - (21%)
Similarity:161/417 - (38%) Gaps:131/417 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 EEDIIQFLEELVEIL----INADES------ISCYEMSCDQYQMFIN---------LV----QYY 535
            :::||:|.|:...|.    .|.|||      ::..:.:.|.|::|||         |:    ..:
Yeast    15 QDEIIEFWEKTESIANIPKENLDESHVNSSLVAYLKFATDSYKVFINTDRDLYRMSLILLESSLF 79

  Fly   536 QMETRWSIKRL--LLKTFTAACHLDYIIVDILL----TSVLPLEIV----------EDMKTHFSN 584
            :.:..:.:.:|  ||.......::.:|||.|||    .:|..|||:          ..:.|.|:.
Yeast    80 EFKKEFCLSKLQSLLNIDLLEMNMKFIIVYILLCEAKKNVYSLEIMLKFQGFTVFYNTLYTQFAY 144

  Fly   585 L-----------------------------------------DRFKQL-VKMLTIIFSLGQPMPV 607
            |                                         |..||: ..::.::|.:      
Yeast   145 LSKYGKERTVASKHQYNSNNSSTGTSLDSLDRSLTDIDLGIIDEMKQISTVLMDLLFQI------ 203

  Fly   608 NHQDYLGVHFAS-------FLLEIVEGNNPEVLVDMV----IALILAFNQQF---------SEHT 652
              ..|.....|:       |:..::|....:.:.||.    ..|:||.|:|:         ....
Yeast   204 --MKYCKCVIANLQIVDDFFVYYMMESMRSDTMDDMFNNAEFKLLLALNEQYMMFAKEYDIENKV 266

  Fly   653 YNVIIEGMQNLPSAKVFTEKLLLLLNREDDPTRLLKHPNEHMNTVLRMFIDIFSHPDTAGM--FY 715
            |..:|.|    ..::.|||.|||..||..||      |.:.|...: :::.:....|.:.|  ||
Yeast   267 YKYLING----SVSRCFTELLLLKFNRASDP------PLQIMMCKI-IYLILTPRGDYSPMNFFY 320

  Fly   716 TNDIKVLIDIVVRQLSDL-DAGSTTRPCYLELCRRILRNTNYQEHQHRKHDLMKIFTRIFCEETE 779
            |||::||||:::|:|.:: :.....|...|.:...:|:||...:..:||.||.|:...:...:..
Yeast   321 TNDLRVLIDVLIRELQNISEDEEVLRNTLLRVLIPLLKNTQLSKTHYRKDDLNKLLNYLSTLDNI 385

  Fly   780 CSAS----DQQ----LVREIANEFPQL 798
            |..|    :.|    |.|:...:.|.|
Yeast   386 CVDSPALHEHQVTVALSRKCLQQIPWL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2258NP_001285000.1 SH3_SPIN90 1..55 CDD:212783
PHA03420 108..>188 CDD:177648
DUF2013 631..766 CDD:286514 42/150 (28%)
LDB17NP_010135.1 DUF2013 235..372 CDD:401404 42/147 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346843
Domainoid 1 1.000 55 1.000 Domainoid score I2740
eggNOG 1 0.900 - - E1_KOG4035
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006257
OrthoInspector 1 1.000 - - oto100003
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13357
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5829
SonicParanoid 1 1.000 - - X4538
TreeFam 00.000 Not matched by this tool.
98.870

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