DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2258 and Nckipsd

DIOPT Version :9

Sequence 1:NP_001285000.1 Gene:CG2258 / 31729 FlyBaseID:FBgn0029997 Length:801 Species:Drosophila melanogaster
Sequence 2:NP_109654.2 Gene:Nckipsd / 80987 MGIID:1931834 Length:714 Species:Mus musculus


Alignment Length:860 Identity:239/860 - (27%)
Similarity:374/860 - (43%) Gaps:213/860 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKALYDFQAVYPKTISFDEGEYFILYQTSARQRNWWQVV-SMKGNIGFVPSNYVMKIKVEHDFL 64
            |.:|||.|::..|..::|..||.|::.:.|:  .:||... :..|..|:||..|:.:::.....:
Mouse     1 MYRALYAFRSAEPNAMAFAAGETFLVLERSS--THWWLAARARSGETGYVPPAYLHRLQGMEQDV 63

  Fly    65 ISFLNSSIESLEKCT-------DHEINGIMSKDELLDRLREKKHTMERLYAESSE------RDGD 116
            :..::.:||::....       ..|..|::.|     .:..:|.|:.|....:|.      ...|
Mouse    64 LQAIDRAIEAVHNTAMRDGGKYSLEQRGVLQK-----LIHHRKETLSRRGTSASSATVMTPSTSD 123

  Fly   117 SSLSYSHSYSDKG------SHRHSHPHPTQSQT-----QLHSQHRQHSPP--------------- 155
            ..|..:.|....|      ..:||.|......|     |:..|.|:.:|.               
Mouse   124 HHLDAAVSRQPNGVCRTGFERQHSLPSSEHLGTDGALYQVPPQPRRAAPTTPPPPVKRRDREALV 188

  Fly   156 ----------PSGGSVGSQRLDMSKKSMSSPAVGSSCGLPQNQGMIESPSMGSMQFQGSSCTIQT 210
                      |||||..|.....|..||.:...|||   |...|...||:...:..:|:..|:..
Mouse   189 ISGSGGRTAIPSGGSSVSSGSSASSTSMDTLYTGSS---PSELGPSCSPTPPPVPRRGAHTTVSQ 250

  Fly   211 PQQQQPLPAP-PAPAPSPSAASATPTAASTSKAATGGDVAQDNSITSEPSETTTTTTTTSEDVVT 274
            ||     |:| .||:|.|                              |:|.....|.::.|   
Mouse   251 PQ-----PSPSKAPSPEP------------------------------PTEEVAAETNSTPD--- 277

  Fly   275 TYKETSQMSTSQQHKPQNGSTASASISASASASALRSNGGNGKANGSATALHQELQQEEADSAPD 339
                                                                 :|:.::|.| |:
Mouse   278 -----------------------------------------------------DLEAQDALS-PE 288

  Fly   340 KSDDASAVQSDDGCPANGDSADNSQALDSIDSPSHRQRGLSLGRIEEGATGGGQLKVESSDVYQI 404
            .:::.:|.::                                  :.....|.           ::
Mouse   289 TTEEKAAAET----------------------------------VVPRTIGA-----------EL 308

  Fly   405 VDALRRNTNLSFDLSCEALRVVLTSLEQLYNGAINPYLEAVAVH-VTGK-VATPKELLGITHDAK 467
            ::.:||||.||.:|...|:.||:..: |....|.:|.:|.|.:. |.|| ::|......:.||.:
Mouse   309 MELVRRNTGLSHELCRVAIGVVVGHI-QATVPASSPIMEQVLLSLVEGKDLSTALPSGQVCHDQQ 372

  Fly   468 RLQYLFAQLADCKNDTEQRTWMLYEDEEDIIQFLEELVEILINADESISCYEMSC--DQYQMFIN 530
            ||:.:||.||..|:|.:||:|.|||||:.|..:||||:.||.:||..: |.:| |  ..::..:.
Mouse   373 RLEVIFADLARRKDDAQQRSWALYEDEDVIRCYLEELLHILTDADPEV-CKKM-CKRSDFESVLA 435

  Fly   531 LVQYYQMETRWSIKRLLLKTFTAACHLDYIIVDILLTSVLPLEIVEDMKTHFSNLDRFKQLVKML 595
            ||.|||||.|.|::.||||.|.|.|.||..|:..|::||||:|:..||:|...:..:......:|
Mouse   436 LVAYYQMEHRASLRLLLLKCFGAMCSLDAAIISTLVSSVLPVELARDMQTDTQDHQKLCYSALVL 500

  Fly   596 TIIFSLGQPMPVNHQDYLGVHFASFLLEIVEGNNP----EVLVDMVIALILAFNQQFSEHTYNVI 656
            .::||:|:.:|..|.::||..||.|||.|||...|    |.|.|:.:.|:||.|...:....|||
Mouse   501 AMVFSMGEAVPYAHYEHLGTPFAQFLLSIVEDGLPMDTTEQLPDLCMNLLLALNLHLTAPEQNVI 565

  Fly   657 IEGMQNLPSAKVFTEKLLLLLNREDDPTRLLKHPNEHMNTVLRMFIDIFSHPDTAGMFYTNDIKV 721
            :..:....:.|:|:|||||||||.|||.|:.:|..:..::||:...|:||...||.:||..|:..
Mouse   566 MAALSRHTNVKIFSEKLLLLLNRGDDPVRIFRHEPQPPHSVLKFLQDVFSSSATAAIFYHTDMMA 630

  Fly   722 LIDIVVRQLSDLDAGSTTRPCYLELCRRILRNTNYQEHQHRKHDLMKIFTRIFCEE---TECSAS 783
            ||||.|||::||..|...|..||.|...::|:|.|.:|:||..||.....||..||   .:|. .
Mouse   631 LIDITVRQIADLSPGDKLRMEYLSLMHAVVRSTPYLQHRHRLSDLQATLRRILTEEEASPQCQ-M 694

  Fly   784 DQQLVREIANEFPQL 798
            |:.:|:|:..|||.|
Mouse   695 DRMIVQEMYKEFPDL 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2258NP_001285000.1 SH3_SPIN90 1..55 CDD:212783 18/54 (33%)
PHA03420 108..>188 CDD:177648 26/121 (21%)
DUF2013 631..766 CDD:286514 56/134 (42%)
NckipsdNP_109654.2 SH3_SPIN90 1..53 CDD:212783 17/53 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 103..126 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..298 43/253 (17%)
Nuclear localization signal. /evidence=ECO:0000255 168..185 2/16 (13%)
DUF2013 558..675 CDD:286514 49/116 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850880
Domainoid 1 1.000 158 1.000 Domainoid score I4126
eggNOG 1 0.900 - - E1_KOG4035
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 276 1.000 Inparanoid score I2930
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006257
OrthoInspector 1 1.000 - - oto94466
orthoMCL 1 0.900 - - OOG6_107366
Panther 1 1.100 - - LDO PTHR13357
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5829
SonicParanoid 1 1.000 - - X4538
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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