DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and FRQ1

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_010661.3 Gene:FRQ1 / 851979 SGDID:S000002781 Length:190 Species:Saccharomyces cerevisiae


Alignment Length:211 Identity:52/211 - (24%)
Similarity:95/211 - (45%) Gaps:36/211 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |...:.|::...|..|::.|.|.:.|:.   :.::..:.:|           .|..:|:..    
Yeast     1 MGAKTSKLSKDDLTCLKQSTYFDRREIQ---QWHKGFLRDC-----------PSGQLARED---- 47

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230
                  |.::....|...:.|.....:|..:||.:.|. :..|.::..|||..|||..|:.::.|
Yeast    48 ------FVKIYKQFFPFGSPEDFANHLFTVFDKDNNGF-IHFEEFITVLSTTSRGTLEEKLSWAF 105

  Fly   231 RVYDLNTDGFITKDEMFTL------LRNCLIKQPQDE-DPDEGVKDLVEIVLKKFDLDKDGKVSL 288
            .:||||.||:||.|||.|:      :...::...:|| .|:..||.    :.|..|.::||.::|
Yeast   106 ELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKK----IFKLMDKNEDGYITL 166

  Fly   289 EDFMGTVTAEPLLIEA 304
            ::|......:|.:|.|
Yeast   167 DEFREGSKVDPSIIGA 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 23/70 (33%)
EF-hand_7 229..292 CDD:290234 23/69 (33%)
FRQ1NP_010661.3 FRQ1 4..179 CDD:227455 49/203 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
TreeFam 00.000 Not matched by this tool.
32.810

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