DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and vsnl1

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_031757643.1 Gene:vsnl1 / 779779 XenbaseID:XB-GENE-952045 Length:205 Species:Xenopus tropicalis


Alignment Length:212 Identity:45/212 - (21%)
Similarity:92/212 - (43%) Gaps:38/212 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 RMDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAV 164
            :|.:.:.|:.|::::.|.|.|.|.:.||.   :.|:..:.:|......|..              
 Frog    14 KMGKQNSKLAPEVMEDLVKSTEFNEHELK---QWYKGFLKDCPSGRLNLDE-------------- 61

  Fly   165 EGIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFC 229
                   |::|....|.........:..|.::||..:| .:....::..||...||:..::..:.
 Frog    62 -------FQQLYVKFFPYGDASKFAQHAFRTFDKNGDG-TIDFREFICALSITSRGSFEQKLNWA 118

  Fly   230 FRVYDLNTDGFITKDEMFTLLR------NCLIKQPQDED---PDEGVKDLVEIVLKKFDLDKDGK 285
            |.:|||:.||.||:.||..::.      ..:|....:||   |::    .|:.:..|.|.:||.:
 Frog   119 FNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQ----RVDKIFSKMDKNKDDQ 179

  Fly   286 VSLEDFMGTVTAEPLLI 302
            ::|::|.....::|.::
 Frog   180 ITLDEFKEAAKSDPSIV 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 20/72 (28%)
EF-hand_7 229..292 CDD:290234 20/71 (28%)
vsnl1XP_031757643.1 FRQ1 29..195 CDD:227455 42/194 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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