DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and Ncs1

DIOPT Version :10

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_077342.1 Gene:Ncs1 / 65153 RGDID:68417 Length:190 Species:Rattus norvegicus


Alignment Length:213 Identity:49/213 - (23%)
Similarity:101/213 - (47%) Gaps:40/213 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|::::.|.:||.||:.|:.   :.|:..:.:|....                    
  Rat     1 MGKSNSKLKPEVVEELTRKTYFTEKEVQ---QWYKGFIKDCPSGQ-------------------- 42

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLE--GWLIGLSTFLRGTPAERAAF 228
             :|...|:::....|...........:|..:|:..:|   |:|  .::..||...|||..|:..:
  Rat    43 -LDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDG---RIEFSEFIQALSVTSRGTLDEKLRW 103

  Fly   229 CFRVYDLNTDGFITKDEM-------FTLLRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKV 286
            .|::|||:.||:||::||       :.::.| .::.|::|:..|   ..|:.:....|.:.|||:
  Rat   104 AFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-TVELPEEENTPE---KRVDRIFAMMDKNADGKL 164

  Fly   287 SLEDFMGTVTAEPLLIEA 304
            :|::|.....|:|.:::|
  Rat   165 TLQEFQEGSKADPSIVQA 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 44/195 (23%)
EF-hand_7 224..292 CDD:463900 21/74 (28%)
Ncs1NP_077342.1 FRQ1 22..174 CDD:444056 40/182 (22%)
Ancestral calcium site 1 36..47 2/31 (6%)
Interaction with IL1RAPL1. /evidence=ECO:0000250|UniProtKB:P62166 174..190 3/9 (33%)

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