DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and rcvrn3

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_957119.2 Gene:rcvrn3 / 572207 ZFINID:ZDB-GENE-040426-1661 Length:191 Species:Danio rerio


Alignment Length:200 Identity:44/200 - (22%)
Similarity:81/200 - (40%) Gaps:38/200 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVEGIDR 169
            ||.:..::||.|:..|||::.|   :.:.|......|.....||..                   
Zfish     6 SGGIPREILDDLKLTTRFSESE---ITQWYENFQKQCPTGRITLQQ------------------- 48

  Fly   170 IVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCFRVYD 234
              |.|:....|.........:.:|.|:|...:| .|..:.:::.|.....|....:..:.|.::|
Zfish    49 --FEEIYGKFFPDSDATTYAQHVFRSFDANDDG-TLDFKEYVVALHMTSSGKSTLKLEWAFSLFD 110

  Fly   235 LNTDGFITKDEMFTLLRNC--LI---KQ---PQDED-PDEGVKDLVEIVLKKFDLDKDGKVSLED 290
            ::.:|::||.|:..|.:..  ||   ||   |.||. |::..:.|..|    ||...:.:|:..:
Zfish   111 VDKNGYVTKPEVIELSQAIFKLIPKDKQTSLPNDESTPEKRAEKLWAI----FDKKDNERVAEGE 171

  Fly   291 FMGTV 295
            |:..:
Zfish   172 FIEAI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 20/72 (28%)
EF-hand_7 229..292 CDD:290234 20/71 (28%)
rcvrn3NP_957119.2 FRQ1 16..179 CDD:227455 40/189 (21%)
EFh 65..125 CDD:238008 13/60 (22%)
EFh 101..177 CDD:298682 21/79 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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