DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and Ncald

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001019542.1 Gene:Ncald / 553106 RGDID:1560287 Length:193 Species:Rattus norvegicus


Alignment Length:219 Identity:50/219 - (22%)
Similarity:104/219 - (47%) Gaps:35/219 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|:::..|.:.|.||:.|:.   ..|:..:.:|                ...|.::|
  Rat     1 MGKQNSKLRPEVMQDLLESTDFTEHEIQ---EWYKGFLRDC----------------PSGHLSME 46

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230
                 .|:::..:.|.........|.:|.::|...:| .:....::|.||...||...::..:.|
  Rat    47 -----EFKKIYGNFFPYGDASKFAEHVFRTFDANGDG-TIDFREFIIALSVTSRGKLEQKLKWAF 105

  Fly   231 RVYDLNTDGFITKDEMFTLLR------NCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLE 289
            .:|||:.:|:|:|.||..:::      :.::|.|:||...|   ...|.:.::.|.::|||:|||
  Rat   106 SMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNRDGKLSLE 167

  Fly   290 DFMGTVTAEPLLIEAFGQCLPTDS 313
            :|:....::|.::... ||.|:.:
  Rat   168 EFIRGAKSDPSIVRLL-QCDPSSA 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 22/69 (32%)
EF-hand_7 229..292 CDD:290234 22/68 (32%)
NcaldNP_001019542.1 FRQ1 14..179 CDD:227455 44/192 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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