DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and Hpcal4

DIOPT Version :10

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_059053.1 Gene:Hpcal4 / 50872 RGDID:708491 Length:191 Species:Rattus norvegicus


Alignment Length:210 Identity:47/210 - (22%)
Similarity:92/210 - (43%) Gaps:36/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|:.|:.|.:.|.|::.||.   :.|:..:.:|......|..               
  Rat     1 MGKNNSKLAPEELEDLVQNTEFSEQELK---QWYKGFLKDCPSGILNLEE--------------- 47

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230
                  |::|....|.........:..|.::||..:| .:....::..||...||:..::..:.|
  Rat    48 ------FQQLYIKFFPYGDASKFAQHAFRTFDKNGDG-TIDFREFICALSVTSRGSFEQKLNWAF 105

  Fly   231 RVYDLNTDGFITKDEMFTLLR------NCLIKQPQDEDPDEGV--KDLVEIVLKKFDLDKDGKVS 287
            .:|||:.||.||:.||..::.      ..:|....::|   |:  :..|:.:.||.|.|||.:::
  Rat   106 EMYDLDGDGRITRLEMLEIIEAIYKMVGTVIMMRMNQD---GLTPQQRVDKIFKKMDQDKDDQIT 167

  Fly   288 LEDFMGTVTAEPLLI 302
            ||:|.....::|.::
  Rat   168 LEEFKEAAKSDPSIV 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 43/194 (22%)
EF-hand_7 224..292 CDD:463900 22/75 (29%)
Hpcal4NP_059053.1 FRQ1 21..177 CDD:444056 40/183 (22%)

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