DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and ncs1

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_988973.1 Gene:ncs1 / 394570 XenbaseID:XB-GENE-953740 Length:190 Species:Xenopus tropicalis


Alignment Length:213 Identity:49/213 - (23%)
Similarity:101/213 - (47%) Gaps:40/213 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|::::.|.:||.||:.|:.   :.|:..:.:|....                    
 Frog     1 MGKSNSKLKPEVVEELTRKTYFTEKEVQ---QWYKGFIKDCPSGQ-------------------- 42

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLE--GWLIGLSTFLRGTPAERAAF 228
             :|...|:::....|...........:|..:|:..:|   |:|  .::..||...|||..|:..:
 Frog    43 -LDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDG---RIEFSEFIQALSVTSRGTLDEKLRW 103

  Fly   229 CFRVYDLNTDGFITKDEM-------FTLLRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKV 286
            .|::|||:.||:||::||       :.::.| .::.|::|:..|   ..|:.:....|.:.|||:
 Frog   104 AFKLYDLDNDGYITRNEMLDIVDAIYQMVGN-TVELPEEENTPE---KRVDRIFAMMDKNSDGKL 164

  Fly   287 SLEDFMGTVTAEPLLIEA 304
            :|::|.....|:|.:::|
 Frog   165 TLQEFQEGSKADPSIVQA 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 20/70 (29%)
EF-hand_7 229..292 CDD:290234 20/69 (29%)
ncs1NP_988973.1 FRQ1 20..179 CDD:227455 43/189 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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