DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and hpca

DIOPT Version :10

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_957017.1 Gene:hpca / 393696 ZFINID:ZDB-GENE-040426-1683 Length:193 Species:Danio rerio


Alignment Length:220 Identity:54/220 - (24%)
Similarity:106/220 - (48%) Gaps:35/220 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|::|..||:.|.||..||.   ..|:..:.:|                ...|..||
Zfish     1 MGKQNSKLRPEMLQDLRENTEFTDHELQ---EWYKGFLKDC----------------PSGHLNVE 46

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230
                 .|:::..:.|.........|.:|.::|..::| .:....::|.||...||...::..:.|
Zfish    47 -----EFKKIYANFFPYGDASKFAEHVFRTFDTNNDG-TIDFREFIIALSVTSRGKLEQKLKWAF 105

  Fly   231 RVYDLNTDGFITKDEMFTLLR------NCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLE 289
            .:|||:.:|:|:::||..:::      :.::|.|:||...|...|.   :.::.||:.|||:|||
Zfish   106 SMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDK---IFRQMDLNNDGKLSLE 167

  Fly   290 DFMGTVTAEPLLIEAFGQCLPTDSA 314
            :|:....::|.::... ||.|:.::
Zfish   168 EFIKGAKSDPSIVRLL-QCDPSSAS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 47/192 (24%)
EF-hand_7 224..292 CDD:463900 22/73 (30%)
hpcaNP_957017.1 FRQ1 21..175 CDD:444056 43/181 (24%)

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