DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and Frq1

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001033853.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster


Alignment Length:211 Identity:54/211 - (25%)
Similarity:97/211 - (45%) Gaps:37/211 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRK-LVSNCQYAAKTLASSSSSAAIAK---PH 161
            |.:.|.|:....:|.|...|.||:.|:    |.:.| .:.:|   ...|.:......|.|   |.
  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEI----RQWHKGFLKDC---PNGLLTEQGFIKIYKQFFPQ 58

  Fly   162 AAVEGIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERA 226
            ........:||                  |:|   |:.::| .:..|.::..||...:|...|:.
  Fly    59 GDPSKFASLVF------------------RVF---DENNDG-SIEFEEFIRALSVTSKGNLDEKL 101

  Fly   227 AFCFRVYDLNTDGFITKDEMFTL---LRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSL 288
            .:.||:||::.||:||::||:.:   :...:.:|||.||.:...| .|:.:..:.|.:.|||::|
  Fly   102 QWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQK-RVDKIFDQMDKNHDGKLTL 165

  Fly   289 EDFMGTVTAEPLLIEA 304
            |:|.....|:|.:::|
  Fly   166 EEFREGSKADPRIVQA 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 23/66 (35%)
EF-hand_7 229..292 CDD:290234 23/65 (35%)
Frq1NP_001033853.1 FRQ1 9..178 CDD:227455 50/198 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442287
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
54.840

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