DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2256 and Guca1b

DIOPT Version :10

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001101668.1 Gene:Guca1b / 316218 RGDID:1308191 Length:201 Species:Rattus norvegicus


Alignment Length:116 Identity:31/116 - (26%)
Similarity:59/116 - (50%) Gaps:17/116 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 MERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCFRVYDLNTDGFITKDEM------- 246
            :|.:|.::||..:.....|| ::..|:..||||...:..:.|::||.:.:|.|.:.|:       
  Rat    58 VEGMFRAFDKNGDNTIDFLE-YVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRLELLDIVEAI 121

  Fly   247 FTLLRNC-----LIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLEDFM 292
            :.|.:.|     |.:|.|...|:|    :|:.:....|.:.||::||.:|:
  Rat   122 YKLKKACRAELDLEQQGQLLTPEE----VVDRIFLLVDENGDGQLSLTEFI 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 30/112 (27%)
EF-hand_7 224..292 CDD:463900 19/79 (24%)
Guca1bNP_001101668.1 FRQ1 34..172 CDD:444056 31/116 (27%)

Return to query results.
Submit another query.