DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and Hpca

DIOPT Version :10

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_058818.1 Gene:Hpca / 29177 RGDID:620060 Length:193 Species:Rattus norvegicus


Alignment Length:220 Identity:50/220 - (22%)
Similarity:105/220 - (47%) Gaps:35/220 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|::|..||:.|.|::.||.   ..|:..:.:|.                   ..:.
  Rat     1 MGKQNSKLRPEMLQDLRENTEFSELELQ---EWYKGFLKDCP-------------------TGIL 43

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230
            .:|.  |:::..:.|.........|.:|.::|...:| .:....::|.||...||...::..:.|
  Rat    44 NVDE--FKKIYANFFPYGDASKFAEHVFRTFDTNSDG-TIDFREFIIALSVTSRGRLEQKLMWAF 105

  Fly   231 RVYDLNTDGFITKDEMFTLLR------NCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLE 289
            .:|||:.:|:|:::||..:::      :.::|.|:||...|   ...|.:.::.|.:.|||:|||
  Rat   106 SMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPE---KRTEKIFRQMDTNNDGKLSLE 167

  Fly   290 DFMGTVTAEPLLIEAFGQCLPTDSA 314
            :|:....::|.::... ||.|:.::
  Rat   168 EFIRGAKSDPSIVRLL-QCDPSSAS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 43/192 (22%)
EF-hand_7 224..292 CDD:463900 21/73 (29%)
HpcaNP_058818.1 FRQ1 41..175 CDD:444056 34/139 (24%)

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