DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and ncs-2

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001366858.1 Gene:ncs-2 / 172866 WormBaseID:WBGene00003564 Length:190 Species:Caenorhabditis elegans


Alignment Length:204 Identity:44/204 - (21%)
Similarity:92/204 - (45%) Gaps:39/204 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PKL----LDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVEGIDRI 170
            |||    |:.|:|.|.||::::.   ..|:..|.:|                .|.|...|     
 Worm     8 PKLSKEDLEFLKKNTNFTEEQIK---EWYKGFVQDC----------------PKGHLTKE----- 48

  Fly   171 VFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCFRVYDL 235
            .|.::....|...:.|...|.:|.::|..:.|. :..:.:|:.::....|||.::..:.||:||:
 Worm    49 QFIKVYKDFFPSGSAEGFCEHVFRTFDTDNSGF-IDFKEFLLAINVTSSGTPEQKLEWAFRMYDI 112

  Fly   236 NTDGFITKDEMFTLLRNCL------IKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLEDFMGT 294
            :.:|.|.:.||..::....      :.:..|:.|.:..|    ::.:|.|::.|.:::|::|:..
 Worm   113 DGNGTIDEKEMIKIIEAIYEMLGPEVTKSADDSPRKRAK----MIFEKMDVNNDKELTLKEFVDG 173

  Fly   295 VTAEPLLIE 303
            ..|:..|.:
 Worm   174 CLADKELFQ 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 15/69 (22%)
EF-hand_7 229..292 CDD:290234 15/68 (22%)
ncs-2NP_001366858.1 FRQ1 18..178 CDD:227455 39/188 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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