DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and guca1c

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_002940159.1 Gene:guca1c / 100497028 XenbaseID:XB-GENE-6039675 Length:188 Species:Xenopus tropicalis


Alignment Length:116 Identity:28/116 - (24%)
Similarity:64/116 - (55%) Gaps:6/116 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 MERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCFRVYDLNTDGFITKDEMFTLLRNC 253
            ::::|.::|...:|....|| ::..::..|||...::..:.|::||.:.:|.|.:.|:.::|...
 Frog    54 IDQVFSTFDMNKDGFIDFLE-FIAAINLVLRGKIDQKLKWYFKLYDADGNGSIDRKELLSILTAV 117

  Fly   254 -LIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLEDFMGTVTAEPLLIE 303
             .|...:...|:|    ...:|.:|.|::.||:::||:|:..:..:..|:|
 Frog   118 RAINGHRGMSPEE----FTSMVFEKIDVNGDGELTLEEFINGIEKDEQLLE 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 17/64 (27%)
EF-hand_7 229..292 CDD:290234 17/63 (27%)
guca1cXP_002940159.1 FRQ1 15..160 CDD:227455 26/110 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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