DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2256 and kcnip4

DIOPT Version :9

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_002936758.1 Gene:kcnip4 / 100491280 XenbaseID:XB-GENE-5753458 Length:233 Species:Xenopus tropicalis


Alignment Length:201 Identity:60/201 - (29%)
Similarity:97/201 - (48%) Gaps:39/201 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 DEL---SGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAA 163
            |||   :.:..|:.|:.|..:|:|||.||..|   ||...:.|                  |...
 Frog    42 DELETATVRHRPEALELLEAQTKFTKKELQIL---YRGFKNEC------------------PSGI 85

  Fly   164 VEGIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAF 228
            |   :...|:::....|...........:|.::|..|.| .:..|.::|||||.||||..|:..:
 Frog    86 V---NEETFKDIYAQFFPQGDASTYAHFLFNAFDTDHNG-SVSFEDFVIGLSTLLRGTIQEKLNW 146

  Fly   229 CFRVYDLNTDGFITKDEMFTLLRN-------CLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKV 286
            .|.:||:|.||:|||:|||.::::       |.....::|.|    :..||...:|.|::|||.|
 Frog   147 AFNLYDINKDGYITKEEMFDIMKSIYDMMGKCTYPLVREETP----RQHVENFFQKMDINKDGVV 207

  Fly   287 SLEDFM 292
            ::|:|:
 Frog   208 TIEEFI 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 24/70 (34%)
EF-hand_7 229..292 CDD:290234 24/69 (35%)
kcnip4XP_002936758.1 FRQ1 63..222 CDD:227455 54/180 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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