DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ldsdh1 and YDL114W

DIOPT Version :9

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_010169.1 Gene:YDL114W / 851444 SGDID:S000002272 Length:308 Species:Saccharomyces cerevisiae


Alignment Length:275 Identity:63/275 - (22%)
Similarity:115/275 - (41%) Gaps:51/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELA 126
            ||||...|:|.|:|.:.::....::..|:.   :..|..:::.|  ..|.|.|::|..:|:..|.
Yeast    42 LITGGSSGLGFELAKELSRRINKVIVADIQ---SFPTFAQVEYN--NIFYYQCDITSLDEIKNLK 101

  Fly   127 QKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVA 191
            :.:.::||.|::::||||:.....|...|..|:..:.:||::..:.||..|..|||:..||.|:.
Yeast   102 KAIERDHGNINIIINNAGVAHIKKLEHMTNKEVEQLIDINLIGAYRIISTFAEDMIDNREGFIIN 166

  Fly   192 LSSCAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNN---VKLTTIYPYMIDTGLCKNPR 253
            ::|..|......|..|..:|.|:.|:...:....|..:.:.|   :|...:.|..|.|       
Yeast   167 IASVLGELTPARLTSYGASKGAMIGFHKCMSRHFRSLSTECNKTGIKTLLVCPGKIKT------- 224

  Fly   254 YRFPNLF------------KLIPADVAAGSIIEAQRQGLEEAAIP-------------------- 286
                |:|            .:||:.:|...|...:...|:....|                    
Yeast   225 ----NMFIDVPTPSKLLAPDIIPSQLALAIISAMEHNHLQTLNAPYYVNLVPFFKTLSWPYRHLL 285

  Fly   287 RHFVAAEKIGRLIPR 301
            :||...:.:....||
Yeast   286 KHFSGMDHVTSTSPR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 adh_short 59..248 CDD:278532 51/188 (27%)
NADB_Rossmann 60..287 CDD:304358 59/259 (23%)
YDL114WNP_010169.1 17beta-HSDXI-like_SDR_c 40..282 CDD:187598 59/255 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I1741
eggNOG 1 0.900 - - E2759_KOG1201
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I1486
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 1 1.000 - - mtm9177
orthoMCL 1 0.900 - - OOG6_100599
Panther 1 1.100 - - O PTHR24322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.820

Return to query results.
Submit another query.