DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and TDA5

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_013530.1 Gene:TDA5 / 851146 SGDID:S000004418 Length:326 Species:Saccharomyces cerevisiae


Alignment Length:305 Identity:70/305 - (22%)
Similarity:124/305 - (40%) Gaps:38/305 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLLVVDIVMLIVKFWLAIAEAIV---GLFRAPPLDDVNGKVVLITGTGHGMGKEMALQ----YAK 80
            :.:.:.|..|::..:| ||.:.:   |......|.:....:|||||...|:|:.:..|    |:.
Yeast    33 ISICLTIYTLLINAFL-IANSYIKRSGQVAWKSLREFKNGIVLITGGSKGLGRAIVSQLLQDYSN 96

  Fly    81 LGATILCWDV-NEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKV-RKEHGFIHVVVNNA 143
            |  |||..|: .....|..||::          :|:::..||:..|...: ||....|.::||||
Yeast    97 L--TILNVDICPSSVRNTRVKDL----------ICDLSDDEEVAALLNLLKRKYKNEIRLIVNNA 149

  Fly   144 GIMPCHPLLEHTENE-IRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPY 207
            |:..........|.: :..:::||..:....||...|......:..||.::|..|:.....:..|
Yeast   150 GVRANFTGFNGMERDNLDKIFKINTFAPLQFIQELAPSRHSTRQCYIVNIASILGILTPAKVAAY 214

  Fly   208 CGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGL---CKNPRYRFPNLFKLIPADVAA 269
            ..:|.|:..:..:...|| |.....|::...:.|..::|.:   .|.||..|.   .:|.....|
Yeast   215 AASKAALIAFHQSYSFEL-QNEGVRNIRTLLVTPGQLNTEMFAGFKPPRQFFA---PVIDITTLA 275

  Fly   270 GSIIE----AQRQGLEEAAIPRHFVAAEKIGRLIPRKAMRLVNDF 310
            ..|:.    .||..|.|.    .:.:...:...:|....|:|..|
Yeast   276 AKIVRYCELGQRGQLNEP----FYCSFAHLLMCVPYSLQRIVRSF 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 59/240 (25%)
TDA5NP_013530.1 Rossmann-fold NAD(P)(+)-binding proteins 72..309 CDD:473865 60/256 (23%)

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