DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and BDH1

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_011511369.1 Gene:BDH1 / 622 HGNCID:1027 Length:347 Species:Homo sapiens


Alignment Length:205 Identity:57/205 - (27%)
Similarity:91/205 - (44%) Gaps:17/205 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 APPLDDVNGKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKN-NGGKAFGYV 113
            |...:.|..|.||:||...|.|..:|......|..:....:.:...:..|||:.: |..:.....
Human    51 ASAAEPVGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQ 115

  Fly   114 CNVTKREELIELAQKVRK-----EHGFIHVVVNNAGIMPCHPLLEHTENE-IRLMYEINVLSHFW 172
            .||...||:.::.:.||.     |.| :..:||||||..... :|.|..| .:.:.|:|:.....
Human   116 LNVCSSEEVEKVVEIVRSSLKDPEKG-MWGLVNNAGISTFGE-VEFTSLETYKQVAEVNLWGTVR 178

  Fly   173 IIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAVRGY-------MAALVEELRQKNP 230
            :.::||| :|.|.:|.:|.:||..|........|||.|||.|..:       |..|..::....|
Human   179 MTKSFLP-LIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMYPLGVKVSVVEP 242

  Fly   231 QNNVKLTTIY 240
            .|.:..|::|
Human   243 GNFIAATSLY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 54/195 (28%)
BDH1XP_011511369.1 type2_17beta_HSD-like_SDR_c 60..345 CDD:187665 55/196 (28%)

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