Protein Alignment Ldsdh1 and rdh20

DIOPT Version :9

• Sequence 1: NP_572436.1
• Gene: Ldsdh1 / 31726
• FlyBaseID: FBgn0029994
• Length: 320
• Species: Drosophila melanogaster
• Sequence 2: XP_021332944.1
• Gene: rdh20 / 555864
• ZFINID: ZDB-GENE-131127-122
• Length: 316
• Species: Danio rerio
• Alignment Length: 276
• Identity: 91/276 - (32%)
• Similarity: 153/276 - (55%)
• Gaps: 19/276 - (6%)

  Fly    19 IYNIVLLVVDIVMLIVKFWLAIAEAIVGLFRAPPLDDVNGKVVLITGTGHGMGKEMALQYAKLGA 83
            :.::.::::|::..|::..|.:      :|| |....::|::|||||:|..:|:..||::.|.||
Zfish     4 LMDLQVMLLDVLYFILRSCLRL------VFR-PRTKPIDGELVLITGSGGALGRLFALEFTKHGA 61

  Fly    84 TILCWDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKVRKEHG-FIHVVVNNAGIMP 147
            .::.||||.:.|..|.|.::..||:|..|..:||||||:...|..||:|.| .:..:|||||::.
Zfish    62 EVVLWDVNGEANEDTAKLVRARGGQAHAYTVDVTKREEVYRTADLVREEVGRDVTYLVNNAGVVA 126

  Fly   148 CHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKF 212
            ...||:..:..:....::|..:.||.::||||.|.::|.|.|:.::|..|||....:..||.:||
Zfish   127 GERLLDCPDYLLERTLKVNCHALFWTVKAFLPQMKDKNHGHIITIASVLGLFSTACVEDYCASKF 191

  Fly   213 AVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCKNPRYR------FPNLFKLIPADVAAGS 271
            |..|:..:|..||..:: .:.||.|.:.||::|||:.:..|.|      .|.|..|.....|..:
Zfish   192 AAVGFHESLAHELLTED-LDGVKTTLVCPYIVDTGMFEGCRIREEVALILPPLEPLYCVQQAMNA 255

  Fly   272 IIEAQRQGLEEAAIPR 287
            |:..|    ....|||
Zfish   256 ILIDQ----PLVCIPR 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ldsdh1	NP_572436.1	adh_short	59..248	CDD:278532	72/189 (38%)
		NADB_Rossmann	60..287	CDD:304358	82/233 (35%)
rdh20	XP_021332944.1	17beta-HSDXI-like_SDR_c	38..282	CDD:187598	84/235 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1373099at2759
OrthoFinder	1	1.000	-	-		FOG0000227
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24322
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	4.020