DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and LOC4576760

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_061498291.1 Gene:LOC4576760 / 4576760 VectorBaseID:AGAMI1_012865 Length:339 Species:Anopheles gambiae


Alignment Length:230 Identity:76/230 - (33%)
Similarity:131/230 - (56%) Gaps:7/230 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IYNIVLLVVDIVMLIVKFWLAIAEAIVGLFRAPPLDDVNGKVVLITGTGHGMGKEMALQYAKLGA 83
            :.::|...|.:|.|:|:|:       .||.|.....:::|...|:||..:|:|:::.||.|:.|.
Mosquito    40 VLDVVTFFVLLVPLVVQFF-------AGLTRKATKKNISGWTALVTGGANGLGRDICLQLAQTGC 97

  Fly    84 TILCWDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAGIMPC 148
            .|...|:::....|||.:::..|.||..:..:|:..|.:..|.::|..:.|.:.::|||||::|.
Mosquito    98 HIAVVDLDDVNGAQTVADVRKLGVKAQFFKADVSSFEAVSNLKREVSSKLGPVDILVNNAGVLPL 162

  Fly   149 HPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFA 213
            ..|.|.|.::::.:.|||:|||.|.::.|..|||:|..|.|||::|.|....:..::.|..:|:.
Mosquito   163 MSLREGTPDDLKKVIEINLLSHLWTLRVFTDDMIQRKRGHIVAIASIASYLPIERIITYAASKYG 227

  Fly   214 VRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGL 248
            |||.|.:...||..:...:.||.||:||..|.|.|
Mosquito   228 VRGLMGSFASELHNEGVDDIVKTTTVYPCFIKTRL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 66/189 (35%)
LOC4576760XP_061498291.1 None

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