DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ldsdh1 and dhrs3b

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001006070.1 Gene:dhrs3b / 450050 ZFINID:ZDB-GENE-041010-172 Length:302 Species:Danio rerio


Alignment Length:293 Identity:86/293 - (29%)
Similarity:147/293 - (50%) Gaps:11/293 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IVLLVVDIVMLIVKFWLAIAEAIVGLFRAPPLDDVNGKVVLITGTGHGMGKEMALQYAKLGA-TI 85
            :|||.:.|:...||       |.|..|......|:.|.||||||.|.|:|:.:|.::|..|| .:
Zfish     9 VVLLPIQILYYTVK-------ATVCWFLPSRRRDLTGDVVLITGGGRGIGRHLAKEFAVRGAKKL 66

  Fly    86 LCWDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAGIMPCHP 150
            :.|...|:...:|.:||...|.:...:||:|..|||:.:.|:.||::.|.:.::||||.::....
Zfish    67 ILWGRTEKCLKETCEEITLMGTECHYFVCDVANREEVYKQAKVVREKVGDVTILVNNAAVVHGKS 131

  Fly   151 LLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAVR 215
            ||:..::.:.....||.:..||..:||||.|:|...|.:|.::|...|..:...:.||.::.:..
Zfish   132 LLDSDDDALLKSQHINTMGQFWTTKAFLPRMLELQNGHVVCVNSILSLSPIPGAIDYCTSEASSL 196

  Fly   216 GYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGL 280
            .:|.:|...|..   ...|..||:.|:..:|.:.:..|.|||.||..:..:|.|...::|.|...
Zfish   197 AFMESLTLGLLD---CPGVACTTVLPFHTNTEMFQGMRVRFPQLFPPLKPEVVAQRTVDAVRTNT 258

  Fly   281 EEAAIPRHFVAAEKIGRLIPRKAMRLVNDFFDT 313
            ....:|....|...:..::|:.|:..::.|..|
Zfish   259 AFVYLPWTMNALVILKSMLPQSALEEIHRFSGT 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 69/227 (30%)
dhrs3bNP_001006070.1 17beta-HSDXI-like_SDR_c 53..281 CDD:187598 63/230 (27%)

Return to query results.
Submit another query.