DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and CG17121

DIOPT Version :9

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_651114.1 Gene:CG17121 / 42721 FlyBaseID:FBgn0039043 Length:361 Species:Drosophila melanogaster


Alignment Length:328 Identity:98/328 - (29%)
Similarity:157/328 - (47%) Gaps:55/328 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TQSADNGSNANSND-----IYN----IVLLVVDIVMLIV--------KFWLAIAEAIVGLFRAPP 52
            ||:|   :.|:.||     |:|    :.||::.:|:|.|        .|.|.:.|          
  Fly    36 TQAA---AQAHRNDETTRAIFNLKVIVFLLLLPLVLLAVFLKHLLDYLFALGLKE---------- 87

  Fly    53 LDDVNGKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVK---EIKNNGGKAFGYVC 114
             .||:|||.|:||.|.|:|:|:.|:.|:.|..:...|||.:...:||:   :|.....||  |..
  Fly    88 -KDVSGKVALVTGGGSGLGREICLELARRGCKLAVVDVNSKGCYETVELLSKIPRCVAKA--YKN 149

  Fly   115 NVTKREELIELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLP 179
            :|:...||..:|.||.||.|.:.::||||.:||.........:||..:.::|:.|:....:.|||
  Fly   150 DVSSPRELQLMAAKVEKELGPVDILVNNASLMPMTSTPSLKSDEIDTILQLNLGSYIMTTKEFLP 214

  Fly   180 DMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMI 244
            .||.|..|.:||:::.|||..|.....|..||:.:.|:|.:|..|||..: .:.|:.|....|::
  Fly   215 KMINRKSGHLVAVNALAGLVPLPGAGIYTATKYGIEGFMESLRAELRLSD-CDYVRTTVANAYLM 278

  Fly   245 ----------DTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGLEEAAIPRHFVAAEKIGRLI 299
                      |.|:.|:    :|.|    |....|..|::..........:|:.|..:..:.||:
  Fly   279 RTSGDLPLLSDAGIAKS----YPGL----PTPYVAEKIVKGVLLNERMVYVPKIFALSVWLLRLL 335

  Fly   300 PRK 302
            |.|
  Fly   336 PTK 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 adh_short 59..248 CDD:278532 66/201 (33%)
NADB_Rossmann 60..287 CDD:304358 72/239 (30%)
CG17121NP_651114.1 DltE 91..349 CDD:223377 80/259 (31%)
NADB_Rossmann 94..338 CDD:304358 77/254 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447547
Domainoid 1 1.000 91 1.000 Domainoid score I1741
eggNOG 1 0.900 - - E2759_KOG1201
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I1486
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 1 1.000 - - mtm9177
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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