DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and CG2070

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_610308.2 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster


Alignment Length:258 Identity:67/258 - (25%)
Similarity:117/258 - (45%) Gaps:28/258 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GKVVLITGTGHGMGKEMALQYAKLGATI--LCWDVN--EQTNNQTVKEIKNNGGKAFGYVCNVTK 118
            |:|.::||...|:|||..|:.|:.|||:  .|.|:.  |....:.:|...|.  ..|....::..
  Fly    43 GRVAIVTGCNQGIGKETVLELARRGATVYMACRDMKKCENARREIIKATNNQ--NIFARQLDLCS 105

  Fly   119 REELIELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIE 183
            .:.:...|...::|...:|:::||||||.|..:|  ||:...:...:|.:.|| ::...|.|:::
  Fly   106 MKSIRNFAAGFKREQNKLHILINNAGIMDCPKML--TEDGFEMQIGVNHMGHF-LLTLLLLDVLK 167

  Fly   184 RNEGS-IVALSSCAGLFGLI------------NLVPYCGTKFAVRGYMAALVEELRQKNPQNNVK 235
            .:..| :|.|||.|..||.|            ..:.||.:|.|    ......||.::.....|.
  Fly   168 SSAPSRVVVLSSIAHRFGRIKRDDLNSEKSYDRKMAYCQSKLA----NVLFTRELAKRLSGTGVT 228

  Fly   236 LTTIYPYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGLEEAAIPRHFVAAEKI-GR 297
            :..::|.:::|.|.:|..:......||:.|.: ....|:..|.|.:.........:.||: ||
  Fly   229 VNALHPGVVNTELFRNTPFLGSWFGKLLIAPI-IWIFIKTARNGAQTTLYAALDPSLEKVSGR 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 62/243 (26%)
CG2070NP_610308.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 67/258 (26%)

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