DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and CG9265

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_610081.3 Gene:CG9265 / 35369 FlyBaseID:FBgn0032910 Length:399 Species:Drosophila melanogaster


Alignment Length:237 Identity:87/237 - (36%)
Similarity:140/237 - (59%) Gaps:7/237 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PLDDVNGKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNGGKAFGYVCNV 116
            |..::|..:.||||.|:|:|:.:|.:..|:|..::.||:|::...:||:.::..||...|||.::
  Fly    80 PEKELNTDIALITGGGNGLGRLLAERLGKMGTKVVIWDINKKGIAETVQIVEEAGGYCKGYVVDI 144

  Fly   117 TKREELIELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDM 181
            :|:||:.:.|..:|.|.|.|.:::||||::....||:..::.|...:.:||::|||..:||||.|
  Fly   145 SKKEEVYKAADVIRDEVGDITLLINNAGVVSGLHLLDTPDHLIERSFNVNVMAHFWTTKAFLPKM 209

  Fly   182 IERNEGSIVALSSCAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMID- 245
            ||.:.|.|..::|.||..|:..||.||.:|||..|:..||..||.... ..|::.|.|.|:.|. 
  Fly   210 IENDRGHIATIASLAGHVGISKLVDYCASKFAAVGFDEALRLELEVLG-HTNIRTTCICPFFIQA 273

  Fly   246 TGLCKNPRYRF-PNLFKLIPADVAAGSIIEAQRQGLEEAAIP 286
            ||:..:...|: |.   |.|.|| |..:|.|.|:..:.|.||
  Fly   274 TGMFDDVNARWVPT---LNPNDV-ADRVIAAIRKNEKLAVIP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 85/229 (37%)
CG9265NP_610081.3 17beta-HSDXI-like_SDR_c 88..328 CDD:187598 85/229 (37%)

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