DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and CG15629

DIOPT Version :9

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_608859.1 Gene:CG15629 / 33679 FlyBaseID:FBgn0031630 Length:325 Species:Drosophila melanogaster


Alignment Length:288 Identity:91/288 - (31%)
Similarity:155/288 - (53%) Gaps:11/288 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IYNIVLLVVDIVMLIVKFWLAIAEAIVGLF---RAPPLDDVNGKVVLITGTGHGMGKEMALQYAK 80
            ||..:|   |:::..:|....:.|:|....   |...|.|::|:||||||.|.|:|:.:||.:|:
  Fly    17 IYQFLL---DLLVFTIKSVYYVLESIYYSLLPQRFRKLKDISGQVVLITGGGGGVGRLIALNFAR 78

  Fly    81 LGATILCWDVNEQTNNQTVKEIKNNG-GKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAG 144
            |.|.|:.||:|::....||..:..:| ....|||.:::.||::.:.|.:|.:|.|.:.:::||||
  Fly    79 LQARIVIWDINQEAIKTTVDLLAKHGYDNCKGYVVDISDREQIYQRASQVTEEVGPVDILINNAG 143

  Fly   145 IMPCHPLLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPYCG 209
            |:.|.|..|..:..|:..|.||::||:|.::||||.|:..|.|.||.:.|..|:.|......|..
  Fly   144 IVCCKPFWELHDRVIQNTYNINIISHYWTVKAFLPHMMRNNRGHIVTVGSVTGMLGTYGCSDYAA 208

  Fly   210 TKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIE 274
            ||:|..|:..:|:.:|: .:..:.::::.|.||.|:||:....|   |.:..::.....|..|..
  Fly   209 TKYACIGFHESLLTDLK-AHGYDQIQMSLICPYYINTGMFSGVR---PRMMPMLEPQYVADRIEN 269

  Fly   275 AQRQGLEEAAIPRHFVAAEKIGRLIPRK 302
            |.|.......:|........:..|:|.|
  Fly   270 AVRCNEVWCVLPNSIRLLTPLKCLLPAK 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 adh_short 59..248 CDD:278532 69/189 (37%)
NADB_Rossmann 60..287 CDD:304358 76/227 (33%)
CG15629NP_608859.1 17beta-HSDXI-like_SDR_c 58..298 CDD:187598 80/244 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447551
Domainoid 1 1.000 91 1.000 Domainoid score I1741
eggNOG 1 0.900 - - E2759_KOG1201
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I1486
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 1 1.000 - - mtm9177
orthoMCL 1 0.900 - - OOG6_100599
Panther 1 1.100 - - P PTHR24322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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