DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and Dhrs3

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_035433.1 Gene:Dhrs3 / 20148 MGIID:1315215 Length:302 Species:Mus musculus


Alignment Length:293 Identity:85/293 - (29%)
Similarity:152/293 - (51%) Gaps:11/293 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IVLLVVDIVMLIVKFWLAIAEAIVGLFRAPPLDDVNGKVVLITGTGHGMGKEMALQYAKLGA-TI 85
            :|:..:.::.|:.|       |.||:...|.|.|::.:.|||||.|.|:|:.:|.::|:.|| .|
Mouse     9 LVVFPLQMIYLVTK-------AAVGMVLPPKLRDLSRESVLITGGGRGIGRHLAREFAERGARKI 66

  Fly    86 LCWDVNEQTNNQTVKEIKNNGGKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAGIMPCHP 150
            :.|...|:...:|.:||:..|.:...::|:|..|||:.::|:.||::.|.|.::||||.::....
Mouse    67 VLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVYQMAKAVREKVGDITILVNNAAVVHGKS 131

  Fly   151 LLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAVR 215
            |::..::.:.....:|.|..||..:||||.|:|...|.||.|:|...|..:...:.||.:|.:..
Mouse   132 LMDSDDDALLKSQHVNTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAF 196

  Fly   216 GYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQGL 280
            .:|.:|...|..   ...|..||:.|:...|.:.:..|.||||||..:..:..|...::|.:|..
Mouse   197 AFMESLTLGLLD---CPGVSATTVLPFHTSTEMFQGMRVRFPNLFPPLKPETVARRTVDAVQQNQ 258

  Fly   281 EEAAIPRHFVAAEKIGRLIPRKAMRLVNDFFDT 313
            ....:|........:..::|:.|:..::.|..|
Mouse   259 ALLLLPWTMNILIILKSILPQAALEEIHRFSGT 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 71/227 (31%)
Dhrs3NP_035433.1 17beta-HSDXI-like_SDR_c 53..281 CDD:187598 65/230 (28%)

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