DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and F28H7.2

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_505742.1 Gene:F28H7.2 / 185096 WormBaseID:WBGene00009236 Length:284 Species:Caenorhabditis elegans


Alignment Length:266 Identity:62/266 - (23%)
Similarity:104/266 - (39%) Gaps:35/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNG---GKAFGYVCNVTKRE 120
            ||.:|||:.:|:|:..|...|..||.:.....|.:...:|...:...|   |.....|.::|:..
 Worm     7 KVAIITGSSNGIGQATARLLASEGAKVTVTGRNAERLEETKNILLGAGVPEGNVLVVVGDITQES 71

  Fly   121 ELIELAQKVRKEHGFIHVVVNNAGI-MPCHPLLEHTENEI---RLMYEINVLSHFWIIQAFLPDM 181
            ....|.:....:.|.|.::|||||. :|...........|   ...:|:||.|...:.|...|. 
 Worm    72 VQENLIKSTLDKFGKIDILVNNAGAGIPDAQGKSGVNQSIDTYHKTFELNVQSVIEMTQKARPH- 135

  Fly   182 IERNEGSIVALSSC-AGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMID 245
            :.:.:|.||.:||. ||....:....|...|.|:..|......:|    ....:::.::.|..:.
 Worm   136 LAKTQGEIVNISSIGAGPAAQVASPYYSIAKAALDQYTRTAAIDL----VPEGIRVNSVSPGAVS 196

  Fly   246 TGLCKNPRYRFPNLFKLIPADVAAGSIIEAQRQ-----GLEEAAIPRHFVAA-EKIGRLIPRKAM 304
            ||.                :.|:.|...|..:.     |.:...|||.|.|. |.|.::|...|.
 Worm   197 TGF----------------SAVSRGLTEEKSKAFYDYLGAQRECIPRGFCAVPEDIAKVIAFLAD 245

  Fly   305 RLVNDF 310
            |..:::
 Worm   246 RNASNY 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 52/239 (22%)
F28H7.2NP_505742.1 Rossmann-fold NAD(P)(+)-binding proteins 4..266 CDD:473865 62/266 (23%)

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