DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and F25D1.5

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_505704.1 Gene:F25D1.5 / 184922 WormBaseID:WBGene00009110 Length:277 Species:Caenorhabditis elegans


Alignment Length:201 Identity:52/201 - (25%)
Similarity:90/201 - (44%) Gaps:19/201 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NGKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNG---GKAFGYVCNVTK 118
            :||.|:|||:.:|:|:..|:.:||.||.:.....||....:|.::|...|   .|....|.:||:
 Worm     5 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 69

  Fly   119 REELIELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENE------IRLMYEINVLSHFWIIQAF 177
            .....::......:.|.|.::|||||.    .|.:.|.|.      .:..:::|..:...:.|..
 Worm    70 ASGQDDIINTTLAKFGKIDILVNNAGA----NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKT 130

  Fly   178 LPDMIERNEGSIVALSS-CAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYP 241
            ...:| :.:|.||.:|| .||.........|...|.|:..|......:|    .|:.|::.::.|
 Worm   131 KEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDL----IQHGVRVNSVSP 190

  Fly   242 YMIDTG 247
            ..:.||
 Worm   191 GAVATG 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 50/198 (25%)
F25D1.5NP_505704.1 SDR_c11 4..263 CDD:187622 52/201 (26%)

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