DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ldsdh1 and cror-1

DIOPT Version :10

Sequence 1:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_497031.1 Gene:cror-1 / 182087 WormBaseID:WBGene00007245 Length:279 Species:Caenorhabditis elegans


Alignment Length:265 Identity:65/265 - (24%)
Similarity:110/265 - (41%) Gaps:41/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NGKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVKEIKNNG---GKAFGYVCNVTK 118
            :|||.|:||:.:|:|:..|:..|:.||.:.....|.|...:|.:||..:|   ......:.::..
 Worm     5 SGKVALVTGSSNGIGRATAILLAREGAKVTITGRNAQRLEETKQEILRSGVPEDHVLSIIADLAT 69

  Fly   119 REELIELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRL---------MYEINVLSHFWII 174
            ....|||........|.:.::|||||     ..:...|..|.:         ...||:.|...:.
 Worm    70 ESGQIELMNSTVDIFGRLDILVNNAG-----AAITDLEGHIGVGTNVSVFDKTMRINLRSVVTLT 129

  Fly   175 QAFLPDMIERNEGSIVALSSCA-GLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTT 238
            |.....:| :.:|.||.:||.| |......|:.|..:|.|:..|..:...:|    .|:.|::.:
 Worm   130 QKAKEHLI-KTKGEIVNVSSIAGGQHAQPELIYYAMSKSALDQYTRSAAIDL----IQHGVRVNS 189

  Fly   239 IYPYMIDTGLCKN---PRYRFPNLFKLI--------------PADVAAGSIIEAQRQGLEEAAIP 286
            :.|..|.||:.:.   .:....|::|.:              |.|||...:..|.|: |....|.
 Worm   190 VSPGDIRTGIYETMGMNKESVENIYKFMESRKECCPIGTIAQPVDVANIIVFLADRK-LSSYIIG 253

  Fly   287 RHFVA 291
            :..||
 Worm   254 QSIVA 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 61/256 (24%)
cror-1NP_497031.1 Rossmann-fold NAD(P)(+)-binding proteins 4..265 CDD:473865 65/265 (25%)

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