DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1571 and FY

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001318555.1 Gene:FY / 831191 AraportID:AT5G13480 Length:657 Species:Arabidopsis thaliana


Alignment Length:463 Identity:96/463 - (20%)
Similarity:169/463 - (36%) Gaps:107/463 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NVTLDQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVEREDSWGEQVLSMIRTTMSVAE--QNNTLN 128
            |:..|    ||:..| |.:.|. |....:|.||..:|.         .:..|.:|..  |.|.|.
plant    16 NINPD----YHHPSG-PFDPNV-DSFGAKRMRKHTQRR---------AVDYTSTVVRYIQFNELI 65

  Fly   129 IYQNFFADLPPELGHDIKMRFRARVANVFHDLW------------LPAR---QLRSIEWMPNNSR 178
            :|.    :|..|..:.|.:..:||.       |            .||.   .|.::.:..|.|.
plant    66 LYM----ELKVESVYSIYVFVQART-------WQRDSRDRTTLQPTPAAAVDMLPTVAYSDNPST 119

  Fly   179 QFMTQYTNHFAKGERL------------RPVTDEPFGGTNG-FYVWDVKNPLKPRITYDSKQQVS 230
            .|..::.:......|.            |.:|    |..:| |.:|:.:: ....:...:..|..
plant   120 SFAAKFVHASLNKNRCSINRVLWTPSGRRLIT----GSQSGEFTLWNGQS-FNFEMILQAHDQPI 179

  Fly   231 LAKICPKDENNMVGGTGLGQVCLWGTFKGGLPIRNCPLEVSHRETTSALCWVHSKSNTEFYSGSL 295
            .:.:...:||.||.|...|.:..|......:...    :.:|:|:...|.:  .|::.:|.|.|.
plant   180 RSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKAN----KTAHKESIRDLSF--CKTDLKFCSCSD 238

  Fly   296 DGSIKYWD-TRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEFEYTIPVRFII---GSDMGHVFV 356
            |.::|.|| |:.:.               :|.:..||..|...::. |.:.::   |.|......
plant   239 DTTVKVWDFTKCVD---------------ESSLTGHGWDVKSVDWH-PTKSLLVSGGKDQLVKLW 287

  Fly   357 GNRKGMTPMETLLAHYQLFVGPVRSI--NRNPFFVKNFLVTGDWRARIWSEEVKDSPSTMYFRKN 419
            ..|.| ..:.:|..|..:    |.|:  |:|    .|:|:|......|...:::.......||.:
plant   288 DTRSG-RELCSLHGHKNI----VLSVKWNQN----GNWLLTASKDQIIKLYDIRTMKELQSFRGH 343

  Fly   420 AQ-ILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKPIRSVDFKVA----IADLVFRPEGDLLA 479
            .: :...||.......||:|..:|.:..|  ::.|..|  .::...|    :.||.:.|.|.||.
plant   344 TKDVTSLAWHPCHEEYFVSGSSDGSICHW--IVGHENP--QIEIPNAHDNSVWDLAWHPIGYLLC 404

  Fly   480 IGLKNGDT 487
            .|..:..|
plant   405 SGSNDHTT 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 51/258 (20%)
WD40 211..>488 CDD:225201 60/288 (21%)
WD40 repeat 229..269 CDD:293791 7/39 (18%)
WD40 repeat 277..325 CDD:293791 10/48 (21%)
WD40 repeat 332..369 CDD:293791 6/39 (15%)
WD40 repeat 379..415 CDD:293791 8/37 (22%)
WD40 repeat 422..447 CDD:293791 6/24 (25%)
FYNP_001318555.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.