DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dync2i2

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001099160.1 Gene:dync2i2 / 794361 ZFINID:ZDB-GENE-070928-9 Length:501 Species:Danio rerio


Alignment Length:510 Identity:113/510 - (22%)
Similarity:181/510 - (35%) Gaps:93/510 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TLDQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVER------EDSWGEQVLSMIRTTMSVAEQNNT 126
            |||..|.   |..|.|     ..:|||..|....|      .::..:.|..  ..|.:..:...|
Zfish     6 TLDLVGA---ESTWRK-----SHQQTQESRSCQTRPVHTTETETQAKDVSE--NGTQTQDQSGQT 60

  Fly   127 LNIYQNFFADLPPEL-----GHDIKMR--FRARVANVFHDLWLPARQLRSIEWMPNNSRQFMTQY 184
            |::.:: ..|.|..|     ..|:.:|  .:...::.|...        .:.|...|........
Zfish    61 LSLDRD-LTDFPGLLDFMRRAEDVVIRELVKNSKSHAFDGF--------EVNWEEQNESVSCMYR 116

  Fly   185 TNHFAKGERLRPVTDEPFGGTN-----GF---------------YVWDVK----NPLKPRITYDS 225
            ..|....|:...||...:..|.     ||               ..|:|.    ||.:|.:..|.
Zfish   117 LQHVDAQEKSLQVTSVSWNCTGSVIACGFGRVDDGDWSNEKACVCTWNVDRQNLNPKRPDVIIDV 181

  Fly   226 KQQVSLAKICPKDENNMVGGTGLGQVCLWGTFKG-GLPIRNCPLEV-SHRETTSALCWVHSKSNT 288
            ...|......|...:.:.||...|:|.:|.|.:. .|.:....:.. :|||....:.||......
Zfish   182 ATPVMCLCFHPVRPSVVAGGLYSGEVVVWDTSRSQDLILAQTGMSADTHREPVYQINWVPGARRG 246

  Fly   289 EF--YSGSLDGSIKYW--DTRDLKMPMQE---LLLEPEPQERQSRMD----SHGVTVLEFEYTIP 342
            ||  .|....|.:..|  |..:.|:.:..   |:.:..||...:...    :.|||.:.......
Zfish   247 EFSVLSAGSGGRVLLWTIDGSEAKLLLSSGYALVRQQMPQSGAASKTRGSLTIGVTAVALSPWDL 311

  Fly   343 VRFIIGSDMGHV----FVGNRKGMTPME----TLLAHYQLFV----GPVRSINRNPFFVKNFLVT 395
            ..|::||:.|.|    |........|.:    .|.|..|...    ||:.|::.:||....|:..
Zfish   312 DTFLVGSEGGLVLKCSFSSETAAAVPSDGESVILRAPMQFSFSPRGGPIHSVHFSPFHRNLFVSV 376

  Fly   396 G-DWRARIWSEEVKDSPSTMYFRKNAQILCGA-WSTGRCSLF--VTGDINGVVDFWDLLLHHRKP 456
            | |..|.:.|  |......:..|.:...:.|. ||..|..:|  |||  .|:|..:||.....:|
Zfish   377 GTDGLAHLHS--VLQPCPLLALRVSDSYVFGVRWSPTRPLVFAAVTG--QGLVQMFDLGRRSLRP 437

  Fly   457 IRSVDFKVA---IADLVFRPE-GDLLAIGLKNGDTHIMTLDESMRQATGKEKALM 507
            :.::|....   ...|.|.|: .:|||:|..:|..:|..|...:.:...||.|::
Zfish   438 VATIDQNAGGQPAYCLEFNPKHTNLLAVGNADGSVNIWQLSAELTEQGAKETAML 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 68/284 (24%)
WD40 211..>488 CDD:225201 77/313 (25%)
WD40 repeat 229..269 CDD:293791 9/40 (23%)
WD40 repeat 277..325 CDD:293791 12/54 (22%)
WD40 repeat 332..369 CDD:293791 9/44 (20%)
WD40 repeat 379..415 CDD:293791 9/36 (25%)
WD40 repeat 422..447 CDD:293791 10/27 (37%)
dync2i2NP_001099160.1 WD40 66..481 CDD:225201 94/427 (22%)
WD40 repeat 130..180 CDD:293791 9/49 (18%)
WD40 repeat 187..229 CDD:293791 8/41 (20%)
WD40 repeat 235..296 CDD:293791 12/60 (20%)
WD40 repeat 301..338 CDD:293791 8/36 (22%)
WD40 repeat 361..399 CDD:293791 10/39 (26%)
WD40 repeat 403..442 CDD:293791 13/40 (33%)
WD40 repeat 450..477 CDD:293791 9/26 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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