DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1571 and dync1i2a

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001429003.1 Gene:dync1i2a / 767729 ZFINID:ZDB-GENE-060929-1086 Length:626 Species:Danio rerio


Alignment Length:554 Identity:124/554 - (22%)
Similarity:198/554 - (35%) Gaps:105/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GRQRLKYIMANPSEKSTQLS---RQMALTVMETENVTLDQHGMYHYEGGWPKEVNFNDEE----Q 92
            ||..||..|.    |.|.:.   :::.....||:..|:.:.          |:....:||    |
Zfish   123 GRGPLKLAMT----KMTHVDFPPKEVVSYTKETQTPTMTEQ----------KDEEDEEEETPAAQ 173

  Fly    93 TQRHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFFADLPPELGHDIKMRFRA--RVAN 155
            .:...:|.:.|:...|:.|     ...:.|:.....::...|.|.   ..|..::..||  ...:
Zfish   174 PEAETEKEKPEEKQVEEAL-----PHELTEEEKLQILHSEEFMDF---FDHSTRIVERALSEHVD 230

  Fly   156 VFHDL----------------------------WLPARQLRSIEWMPNNSRQFMTQYTNHFAKGE 192
            ||.|.                            |...|.:..::|.|......:..|.|:     
Zfish   231 VFFDYSGRDMEEKEGEMQAGTKLSLNRKFVDDRWSKQRVVTCLDWSPQYPELLVASYNNN----- 290

  Fly   193 RLRPVTDEPFGGTNGFYVWDVK-NPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLWGT 256
              .....||.|..   .||::| ....|...:..:..|..|.......|.:||||..||:.||..
Zfish   291 --EEAPHEPDGVA---LVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDN 350

  Fly   257 FKG-GLPIRNCPLE-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPE 319
            ... ..|::..||. .:|......:..|.:::.....|.|.||.:..|....|..|...:    |
Zfish   351 RSNRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSM----E 411

  Fly   320 PQERQSRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFV----GNRKGMTPMETLLAHYQLFVGPVR 380
            ...:||:  |..||.:.|.......|::||:.|.|:.    |:|.|::  |....|:    ||:.
Zfish   412 LVFKQSK--SVAVTSMSFPLGDVNNFVVGSEDGSVYTASRHGSRAGIS--EMFEGHH----GPIT 468

  Fly   381 SIN----RNPFFVKNFLVTG--DWRARIWSEEVKDSPSTMYFRKNAQILCGA-WSTGRCSLFVTG 438
            .|:    ..|....:..:|.  ||..::||.  |::.....|..|:..:... ||....:||...
Zfish   469 GIHCHTAAGPVDFSHLFLTASFDWTVKLWSN--KNNKPLYSFEDNSDYVYDVMWSPVHPALFACV 531

  Fly   439 DINGVVDFWDLLLHHRKPIRS--VDFKVAIADLVFRPEGDLLAIGLKNGDTHIMTLDESMRQATG 501
            |..|.||.|:|......|..|  ||...|:..|.:...|..:|:|...|..||..:.|.:.....
Zfish   532 DGLGRVDLWNLNNDTEVPTASVAVDGSPALNRLRWSQSGREIAVGDSEGQIHIYDVGEQIAVPRN 596

  Fly   502 KEKALMAAMFEREIVRCKLLEARYDEVRLKRKTL 535
            .|    ...|.|.:|  ::.|.|.|...|..:.|
Zfish   597 DE----WTRFVRTLV--EINENRDDAEELAAQRL 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 69/267 (26%)
WD40 repeat 229..269 CDD:293791 13/40 (33%)
WD40 repeat 277..325 CDD:293791 9/47 (19%)
WD40 repeat 332..369 CDD:293791 12/40 (30%)
WD40 repeat 379..415 CDD:293791 8/41 (20%)
WD40 repeat 422..447 CDD:293791 8/25 (32%)
dync1i2aNP_001429003.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..108
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..197 11/69 (16%)
WD 1. /evidence=ECO:0000255 265..314 11/58 (19%)
WD 2. /evidence=ECO:0000255 318..358 11/39 (28%)
WD 3. /evidence=ECO:0000255 367..408 9/40 (23%)
WD 4. /evidence=ECO:0000255 417..457 13/41 (32%)
WD 5. /evidence=ECO:0000255 462..507 11/50 (22%)
WD 6. /evidence=ECO:0000255 510..550 11/39 (28%)
WD 7. /evidence=ECO:0000255 556..595 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.