DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dync1i2a

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_017213212.2 Gene:dync1i2a / 767729 ZFINID:ZDB-GENE-060929-1086 Length:626 Species:Danio rerio


Alignment Length:554 Identity:124/554 - (22%)
Similarity:198/554 - (35%) Gaps:105/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GRQRLKYIMANPSEKSTQLS---RQMALTVMETENVTLDQHGMYHYEGGWPKEVNFNDEE----Q 92
            ||..||..|.    |.|.:.   :::.....||:..|:.:.          |:....:||    |
Zfish   123 GRGPLKLAMT----KMTHVDFPPKEVVSYTKETQTPTMTEQ----------KDEEDEEEETPAAQ 173

  Fly    93 TQRHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFFADLPPELGHDIKMRFRA--RVAN 155
            .:...:|.:.|:...|:.|     ...:.|:.....::...|.|.   ..|..::..||  ...:
Zfish   174 PEAETEKEKPEEKQVEEAL-----PHELTEEEKLQILHSEEFMDF---FDHSTRIVERALSEHVD 230

  Fly   156 VFHDL----------------------------WLPARQLRSIEWMPNNSRQFMTQYTNHFAKGE 192
            ||.|.                            |...|.:..::|.|......:..|.|:     
Zfish   231 VFFDYSGRDMEEKEGEMQAGTKLSLNRKFVDDRWSKQRVVTCLDWSPQYPELLVASYNNN----- 290

  Fly   193 RLRPVTDEPFGGTNGFYVWDVK-NPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLWGT 256
              .....||.|..   .||::| ....|...:..:..|..|.......|.:||||..||:.||..
Zfish   291 --EEAPHEPDGVA---LVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDN 350

  Fly   257 FKG-GLPIRNCPLE-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPE 319
            ... ..|::..||. .:|......:..|.:::.....|.|.||.:..|....|..|...:    |
Zfish   351 RSNRRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSM----E 411

  Fly   320 PQERQSRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFV----GNRKGMTPMETLLAHYQLFVGPVR 380
            ...:||:  |..||.:.|.......|::||:.|.|:.    |:|.|::  |....|:    ||:.
Zfish   412 LVFKQSK--SVAVTSMSFPLGDVNNFVVGSEDGSVYTASRHGSRAGIS--EMFEGHH----GPIT 468

  Fly   381 SIN----RNPFFVKNFLVTG--DWRARIWSEEVKDSPSTMYFRKNAQILCGA-WSTGRCSLFVTG 438
            .|:    ..|....:..:|.  ||..::||.  |::.....|..|:..:... ||....:||...
Zfish   469 GIHCHTAAGPVDFSHLFLTASFDWTVKLWSN--KNNKPLYSFEDNSDYVYDVMWSPVHPALFACV 531

  Fly   439 DINGVVDFWDLLLHHRKPIRS--VDFKVAIADLVFRPEGDLLAIGLKNGDTHIMTLDESMRQATG 501
            |..|.||.|:|......|..|  ||...|:..|.:...|..:|:|...|..||..:.|.:.....
Zfish   532 DGLGRVDLWNLNNDTEVPTASVAVDGSPALNRLRWSQSGREIAVGDSEGQIHIYDVGEQIAVPRN 596

  Fly   502 KEKALMAAMFEREIVRCKLLEARYDEVRLKRKTL 535
            .|    ...|.|.:|  ::.|.|.|...|..:.|
Zfish   597 DE----WTRFVRTLV--EINENRDDAEELAAQRL 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 69/267 (26%)
WD40 211..>488 CDD:225201 75/292 (26%)
WD40 repeat 229..269 CDD:293791 13/40 (33%)
WD40 repeat 277..325 CDD:293791 9/47 (19%)
WD40 repeat 332..369 CDD:293791 12/40 (30%)
WD40 repeat 379..415 CDD:293791 8/41 (20%)
WD40 repeat 422..447 CDD:293791 8/25 (32%)
dync1i2aXP_017213212.2 Dynein_IC2 126..154 CDD:402922 7/31 (23%)
WD40 269..586 CDD:421866 85/340 (25%)
WD40 repeat 270..317 CDD:293791 11/56 (20%)
WD40 repeat 324..363 CDD:293791 11/38 (29%)
WD40 repeat 372..415 CDD:293791 9/46 (20%)
WD40 repeat 423..461 CDD:293791 11/39 (28%)
WD40 repeat 470..509 CDD:293791 8/40 (20%)
WD40 repeat 515..542 CDD:293791 9/26 (35%)
WD40 repeat 561..587 CDD:293791 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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