DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and CG9313

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster


Alignment Length:526 Identity:107/526 - (20%)
Similarity:190/526 - (36%) Gaps:145/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 NFNDEEQ---TQRHRKKVEREDSWGEQVLSMIRTTMSVAEQNN----------TLNIYQNFFADL 137
            ||.:.::   .:..||:.:||..:        |...::|||.|          ...|.||.:.| 
  Fly   269 NFAESQKDGTKKEERKRGKREKKF--------RDKSAIAEQLNKKYLKCWQILERMINQNIYDD- 324

  Fly   138 PPELGHDIKM------RFRARVANVFHDLW------LPARQLRSIEWMPNNSRQFMTQYTNH-FA 189
               :.||.:.      .||....|:. .||      .....:..|.:.|:....|...:.:| |.
  Fly   325 ---IAHDYRYWEDPADEFREGEGNLL-PLWKFQYDKTKKMNVTDILFNPSYYDLFAVCFGSHDFM 385

  Fly   190 KGERLRPVTDEPFGGTNGFY--VWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVC 252
            |             .||..|  ::.||||..|                     :.:..|..|.:|
  Fly   386 K-------------QTNEGYLCLFTVKNPSFP---------------------DYIIQTDCGVMC 416

  Fly   253 -----------LWGTFKGGLPIRN----C--PLEVS------HRETTSALCWVHSKSNTE--FYS 292
                       :.|.:.|.:.:.|    |  ||.||      |.|....:.|....::.|  |:|
  Fly   417 CDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKWGLDMADGEVNFFS 481

  Fly   293 GSLDGSI--------KYWDTRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEFEYTIPVRFIIGS 349
            .|.||.:        |.|.|..:.:..:..|:: .|...:..:.|.| :.:.|.......|::|:
  Fly   482 VSSDGRVFNWILMQNKLWVTTIITLYRENGLVD-GPDGTKVTLKSGG-SCMVFHPVDNKIFLVGT 544

  Fly   350 DMGHVFVGNRKGMTPMET--LLAHYQLFVGPVRSINRNPFFVKNFLVTG-DWRARIWSEEVKDSP 411
            :.|:::    |..|...:  |:.:|...:...| |:.|.|....|:..| ||..::| |:::..|
  Fly   545 ECGYIY----KCSTAFSSKYLMTYYAHNMSVYR-IDFNRFNSNIFVSCGADWMVKVW-EDMRPDP 603

  Fly   412 STMYFRKNAQILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKP--IRSV--DFKVAIADLVFR 472
             ...|...|.:....|:....::|......|.|..:||.::..|.  |::|  ..|..:..|.|.
  Fly   604 -LFIFDLGAAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAICIQAVVPKRKNKLTRLSFN 667

  Fly   473 PEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREIVRCKLLEARYDEVRLKRKTLQM 537
            .:...:.:|.:.|.|..:.|..::|......|                     .::.|.:.|||:
  Fly   668 EKLAFIVVGDEKGVTTSLKLSPNLRMMVKPPK---------------------KQLYLDQNTLQI 711

  Fly   538 AEEERV 543
            .:.|::
  Fly   712 GKLEKL 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 62/291 (21%)
WD40 repeat 229..269 CDD:293791 8/56 (14%)
WD40 repeat 277..325 CDD:293791 12/57 (21%)
WD40 repeat 332..369 CDD:293791 6/38 (16%)
WD40 repeat 379..415 CDD:293791 11/36 (31%)
WD40 repeat 422..447 CDD:293791 4/24 (17%)
CG9313NP_001286657.1 WD40 repeat 362..412 CDD:293791 15/83 (18%)
WD40 413..640 CDD:475233 51/235 (22%)
WD40 repeat 415..454 CDD:293791 9/38 (24%)
WD40 repeat 463..505 CDD:293791 10/41 (24%)
WD40 repeat 513..557 CDD:293791 9/49 (18%)
WD40 repeat 571..608 CDD:293791 11/39 (28%)
WD40 repeat 613..654 CDD:293791 8/40 (20%)

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