DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and Dnai2

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001007727.1 Gene:Dnai2 / 360654 RGDID:1359602 Length:619 Species:Rattus norvegicus


Alignment Length:650 Identity:200/650 - (30%)
Similarity:327/650 - (50%) Gaps:68/650 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FIYSRERRRFGRQCRFQDRN-ELMVSVHPSGRQRLKYIMANPSEKSTQLSRQMALTVMETENVTL 69
            ::|.::|..||:||.|.||. ||.:.:.|:......|:..||.:...|.|..|:.....||...:
  Rat     5 YVYVKKRSEFGKQCNFSDRQAELNIDISPNPELAALYVERNPVDTGIQCSASMSEHEANTERFEM 69

  Fly    70 DQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFF 134
            :..|:.|.||||||:||..:.|||.|.|||||:::::...|:.:........:|||.::||:.:|
  Rat    70 ENCGVNHVEGGWPKDVNPQELEQTIRFRKKVEKDENYINAVMQLGSIMEHCIKQNNAIDIYEEYF 134

  Fly   135 ADLPPELGHDIKMRFRARVANVFHDLWLPARQLRSIEWMPNNSRQFMTQYT-NHFAKGERLRPVT 198
            .|  .|.....:....|:..|||.|.....|....:.|.|:.:::....|: ..|.:        
  Rat   135 DD--EEAVEVTEEAPSAKTINVFRDPQEIKRTATHLSWHPDGNKKLAVAYSCLQFQR-------- 189

  Fly   199 DEPFGGTNGFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLWGTFKGGLPI 263
             .|.|.::..|:||::||.:|.|.......:...:..|||.:.::||...||:..|.|.||.|..
  Rat   190 -SPMGMSHDSYIWDLENPNRPEIALKPSSPLITLEYNPKDSHVLLGGCYNGQIACWDTRKGSLVA 253

  Fly   264 RNCPLEVSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMD 328
            ....:|.|||:......|:.||:.||.:|.|.||.:.:||.|.:..|.:.::::...:|:..  :
  Rat   254 ELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKISEPTEVVIMDITRKEQLE--N 316

  Fly   329 SHGVTVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINRNPFFVKNFL 393
            :.|...||||.|:|.:|::|::.|.|...|||..||.|.::..:....||:.::.||||:.||||
  Rat   317 ALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTPAEKIVCTFSGHHGPIYALQRNPFYPKNFL 381

  Fly   394 VTGDWRARIWSEEVKDSPSTMYFRKN-AQILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKPI 457
            ..|||.|||||||.::| |.|:.|.: |.:..||||..|.::|.|..::|.:|.|||:.....|.
  Rat   382 TVGDWAARIWSEESRES-SIMWTRYHMAYLSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPA 445

  Fly   458 RSVD------FKVAIADLVFRPEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREIV 516
            .|:.      |.:.:.|     .|.|:|.|.:.|.|.::.:..|:......|:.:.:::||||..
  Rat   446 LSLKVCDDPLFCLRVQD-----TGCLIACGSELGTTTLLEVSSSLSTLQRNERNIASSIFERETR 505

  Fly   517 RCKLLEARYDEVRLKRKTLQMAEEERVRKQQQLAPTLELDPDNPDQFVMMIEGDEEFRTAITEFQ 581
            |.|:||||:.|:|||.|.   ..|.|...|::....|:||.       ::.:.:|||      |:
  Rat   506 REKILEARHREMRLKEKG---KAEGRDDDQKEEETALDLDE-------LVNKAEEEF------FE 554

  Fly   582 DIILSVERKRSKRQVIMERTVFEEWNPADEKLQGEPVVYTKPER-KVQTSGNYD-KRTSGEPRAS 644
            .|...::||.:                  |.|:.:|    ||:: .::..|..: :..:||...|
  Rat   555 VIFAELKRKEA------------------EALKKKP----KPKKASIEVEGEDELEDIAGEEEES 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 92/258 (36%)
WD40 211..>488 CDD:225201 99/283 (35%)
WD40 repeat 229..269 CDD:293791 12/39 (31%)
WD40 repeat 277..325 CDD:293791 14/47 (30%)
WD40 repeat 332..369 CDD:293791 16/36 (44%)
WD40 repeat 379..415 CDD:293791 20/35 (57%)
WD40 repeat 422..447 CDD:293791 9/24 (38%)
Dnai2NP_001007727.1 WD40 repeat 165..212 CDD:293791 12/55 (22%)
WD40 <166..489 CDD:225201 108/339 (32%)
WD40 166..472 CDD:295369 105/322 (33%)
WD 1 214..254 12/39 (31%)
WD40 repeat 220..259 CDD:293791 12/38 (32%)
WD 2 261..302 16/40 (40%)
WD40 repeat 266..361 CDD:293791 31/96 (32%)
WD40 repeat 318..347 CDD:293791 11/28 (39%)
WD 3 362..401 22/39 (56%)
WD40 repeat 367..403 CDD:293791 21/36 (58%)
WD 4 405..445 13/39 (33%)
WD40 repeat 410..435 CDD:293791 9/24 (38%)
WD 5 450..489 9/43 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..619 8/35 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217312at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12442
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2212
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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