| Sequence 1: | NP_572435.1 | Gene: | CG1571 / 31725 | FlyBaseID: | FBgn0029993 | Length: | 651 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006240750.1 | Gene: | Dync2i1 / 314523 | RGDID: | 1306493 | Length: | 1037 | Species: | Rattus norvegicus |
| Alignment Length: | 589 | Identity: | 116/589 - (19%) |
|---|---|---|---|
| Similarity: | 194/589 - (32%) | Gaps: | 146/589 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 25 NELMVSVHPSGRQRLK--YIMANPSEKSTQLSRQMALTVMETENVTLDQHGMYHYEGGWPKEVNF 87
Fly 88 NDEEQTQRHRKKVEREDSWGEQVLSMIRTTMSVA------------------EQNNTLNIYQNFF 134
Fly 135 ADLPPELGHDIKMRFRARVANVFHDLWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTD 199
Fly 200 EPFGGTNGFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQV------------- 251
Fly 252 ------CLWG----TFK--GGLPIRN--CPLEVSHRETTSAL---CWVHSKSNTE-------FYS 292
Fly 293 GSLD--GSIKYW-----DTRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEFEYTI--------- 341
Fly 342 -------------PVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVR--SINRNPFFVKN 391
Fly 392 FLV-TGDWRARIWSEEVKDSPSTMYFRKNA--QILCGAWSTGRCSLFVTGDINGVVDFWDLLLHH 453
Fly 454 RKPIR----SVDFKVAIADLVFRPE---GDLLAIGL--KNGDTHIMTLDESMRQATGKEKALMAA 509
Fly 510 MFER 513 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG1571 | NP_572435.1 | WD40 | 210..462 | CDD:295369 | 69/326 (21%) |
| WD40 | 211..>488 | CDD:225201 | 78/356 (22%) | ||
| WD40 repeat | 229..269 | CDD:293791 | 14/66 (21%) | ||
| WD40 repeat | 277..325 | CDD:293791 | 16/64 (25%) | ||
| WD40 repeat | 332..369 | CDD:293791 | 9/58 (16%) | ||
| WD40 repeat | 379..415 | CDD:293791 | 8/38 (21%) | ||
| WD40 repeat | 422..447 | CDD:293791 | 5/24 (21%) | ||
| Dync2i1 | XP_006240750.1 | PRP38_assoc | 87..166 | CDD:289628 | |
| WD40 | 608..1004 | CDD:225201 | 88/423 (21%) | ||
| WD40 | 677..965 | CDD:295369 | 59/293 (20%) | ||
| WD40 repeat | 680..709 | CDD:293791 | 6/28 (21%) | ||
| WD40 repeat | 714..757 | CDD:293791 | 11/42 (26%) | ||
| WD40 repeat | 762..803 | CDD:293791 | 10/40 (25%) | ||
| WD40 repeat | 844..885 | CDD:293791 | 7/40 (18%) | ||
| WD40 repeat | 893..926 | CDD:293791 | 7/33 (21%) | ||
| WD40 repeat | 938..963 | CDD:293791 | 5/24 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1587 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||