DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dyci-1

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001370459.1 Gene:dyci-1 / 177440 WormBaseID:WBGene00015927 Length:643 Species:Caenorhabditis elegans


Alignment Length:448 Identity:102/448 - (22%)
Similarity:180/448 - (40%) Gaps:89/448 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NDEEQTQRHRKKVERE--DSWGEQVLSMIRTTMSVAEQNNTLNIYQNFFADLPPE---LGHDIKM 147
            :|||   ::|..::.|  ||:......:.|..      |..::|..|:..| |.|   ...|:  
 Worm   216 SDEE---KYRLTLDPEFLDSFNRSCKVISRAL------NEEIDICINYTKD-PYEKAIASDDL-- 268

  Fly   148 RFRARVANVFHD-LWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTDEPFGGTNGFYVW 211
               ..:|.|:.| .|...|.:..:        .|...|.:..|.......:.:||.|   ...||
 Worm   269 ---LHLAQVYQDETWTAKRLVTGM--------AFSEHYPDLLAVSYGPCDIPNEPPG---VIVVW 319

  Fly   212 DVKNPLKPRITYD-------SKQQVSLAKICPKDENNMVGGTGLGQVCLWGT--FKGGLPIRNCP 267
            :.|:   .|:|.:       ..|.|:.|:.   ..:.::.|...||:|:|..  ....|||...|
 Worm   320 NTKS---KRMTAEFIVYCQSEIQSVAFARF---HAHLLLAGCESGQICVWDNRLTSRKLPINRSP 378

  Fly   268 LEV-SHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPM--QELLLEPEPQERQSRMDS 329
            |.. :|..|.|.|..|.:|:...|.|.|.||.|..|:..:|..|:  :||:.:.......:||  
 Worm   379 LTTQAHTYTVSCLAVVGTKNAHNFVSLSRDGRICSWNVDNLTQPVDGKELMTKEGKAASATRM-- 441

  Fly   330 HGVTVLEFEYTIPV----RFIIGSDMGHVFVGNRKGMTP--METLLAHYQLFVGPVRSI------ 382
                      :.|:    .|::|:|.|.:...:|.|..|  ::|.:. |:...|.:..|      
 Worm   442 ----------SFPIGEMQTFVVGTDTGEILAASRNGADPAVIKTDVC-YKGHSGTLTGIEFHRAS 495

  Fly   383 ---NRNPFFVKNFLVTGDWRARIWSEEVKDSPSTMYFRKNAQ-ILCGAWSTGRCSLFVTGDINGV 443
               :.:..|:.:   :.||..::||  .||:.....|..:.. :|..|||....::|.:.|.:|.
 Worm   496 GVVDFSHLFISS---SHDWTVKLWS--TKDANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGN 555

  Fly   444 VDFWDLLLHHRKPIRSV-----DFKVAIADLVFRPEGDLLAIGLKNGDTHIMTLDESM 496
            :..|:|......|:..:     ...|.:..|::.|:|..:.:|...|..|:..:.||:
 Worm   556 IFVWNLNEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVFVGDDEGRVHMYDVRESL 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 67/284 (24%)
WD40 211..>488 CDD:225201 72/309 (23%)
WD40 repeat 229..269 CDD:293791 11/41 (27%)
WD40 repeat 277..325 CDD:293791 15/49 (31%)
WD40 repeat 332..369 CDD:293791 9/42 (21%)
WD40 repeat 379..415 CDD:293791 8/44 (18%)
WD40 repeat 422..447 CDD:293791 7/24 (29%)
dyci-1NP_001370459.1 WD40 repeat 286..333 CDD:293791 11/60 (18%)
WD40 repeat 339..383 CDD:293791 13/46 (28%)
WD40 382..>611 CDD:421866 56/246 (23%)
WD40 repeat 388..457 CDD:293791 20/80 (25%)
WD40 repeat 487..528 CDD:293791 8/45 (18%)
WD40 repeat 534..573 CDD:293791 10/38 (26%)
WD40 repeat 581..609 CDD:293791 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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