DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and wdr-60

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001367569.1 Gene:wdr-60 / 175676 WormBaseID:WBGene00016165 Length:668 Species:Caenorhabditis elegans


Alignment Length:602 Identity:114/602 - (18%)
Similarity:194/602 - (32%) Gaps:210/602 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SRERRRFGRQCRFQDRNEL--MVSVHPSGRQRLKYIMAN--------PSEKS---TQLSRQMALT 60
            ::|:|.|||      .|:|  ::|:..:..|....:.:|        ||.||   ||..:.....
 Worm   149 TQEQRAFGR------LNKLRGLISIEVTKSQVFTDLSSNIFEPFNSLPSNKSHALTQTGKDCHTE 207

  Fly    61 VMETENVTLDQ------HG-MYHYEGGWPKEVNFNDEEQ--------TQRHRKKVEREDSWGE-- 108
            .::||....::      |. ....|.|..||....|..:        ||..|:.:..||...|  
 Worm   208 EVQTERGETEEKETQCPHSESTRIEDGIEKERTSTDRARLKKFFFAATQTIREILISEDKSAEED 272

  Fly   109 --------------------QVLSMIRTT-MSVAEQNNTLNIYQNFFADLPPELGHDIKMRFRAR 152
                                ||::..::| :...|.::.|..|:.|.:..|..:...:.:.|   
 Worm   273 ETREKSISKFSRGYNPFRLCQVVTKSKSTCIRKGESDSVLVAYEIFESPAPDLINKSLIVEF--- 334

  Fly   153 VANVFHDLWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTDEPFGGTNGFYVWDVKNPL 217
                                       |:          .:.||                     
 Worm   335 ---------------------------FV----------HKRRP--------------------- 341

  Fly   218 KPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLW-GTFKGGLPIRNCPLEVSHRETTSA--- 278
             |:..:..:..||:.::....:        :..|||. |||        |..::|   .|.|   
 Worm   342 -PKRLFVVESIVSVMELSQSSQ--------ILYVCLMDGTF--------CAFDLS---ITDAFFD 386

  Fly   279 --LCWVHSKSNTEFYSGSLD----------------------------------GSIKYWDTRDL 307
              |.||.|::|......:.|                                  |:|.||....:
 Worm   387 DNLPWVDSETNIALRRPTFDSSFLATTVSDATPLIGIALGKSSVGEEITTIDTAGTISYWIANRV 451

  Fly   308 KMPMQELLL----EPEPQERQSRMDSHGVTVLEF-EYTIPVRFIIGSDMGHVFVGNRKGMTPMET 367
            :.....|||    .|.|..::   .|....|..| ..|.|:||.||:|.|.::     .|...:|
 Worm   452 EKNELRLLLTAVIRPHPVLKR---HSTSFAVSAFCHVTNPLRFFIGTDTGMLY-----SMYKSDT 508

  Fly   368 LLAHYQLF------VGPVRSINRNPFFVKNFLVTGDWRARIWSEEVKDSPSTMYFRK---NAQIL 423
            ..|..:::      .|.|..|..|| .....|:.|.....|.......:.|.:....   :.::.
 Worm   509 SQAIPKIYKTEKEKYGEVTVIAANP-SDNTVLIVGFSNGSISVYRTTQASSIVNIPTADLSTRVT 572

  Fly   424 CGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKPIRSVDFK-----VAIADLVFRPEGDL--LAIG 481
            ..:||....|.|.|...:.::.:||  |..:...:|||.:     |..:|........:  :|.|
 Worm   573 WISWSLTNPSGFYTIHNSNIITYWD--LGFKLSPKSVDHRTDSVQVLASDTWLSENAKIGYMAFG 635

  Fly   482 LKNGDTHIMTLDESMRQ 498
            |.|||:.:..|::..|:
 Worm   636 LSNGDSEVHVLEDPARK 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 61/305 (20%)
WD40 211..>488 CDD:225201 70/337 (21%)
WD40 repeat 229..269 CDD:293791 9/40 (23%)
WD40 repeat 277..325 CDD:293791 16/90 (18%)
WD40 repeat 332..369 CDD:293791 12/37 (32%)
WD40 repeat 379..415 CDD:293791 8/35 (23%)
WD40 repeat 422..447 CDD:293791 5/24 (21%)
wdr-60NP_001367569.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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