DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and Dync1i2

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001185801.1 Gene:Dync1i2 / 13427 MGIID:107750 Length:655 Species:Mus musculus


Alignment Length:581 Identity:126/581 - (21%)
Similarity:212/581 - (36%) Gaps:128/581 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DRNELMVSVHPS---GRQRLKYIMANPSEKSTQLS---RQMALTVMETENVTLDQHGMYHYEGGW 81
            |.:..::.:|..   ||..:|..||    |.||:.   |::.....||:.....|          
Mouse   134 DTDPSVLQLHSDSDLGRGPIKLGMA----KITQVDFPPREIVTYTKETQTPVTAQ---------- 184

  Fly    82 PKEVNFNDEE--------------QTQRHRKKVEREDS----------------WGEQVLSMIRT 116
            |||    |||              :.::..||.|..||                ..|:.||....
Mouse   185 PKE----DEEEEDDVATPKPPVEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDH 245

  Fly   117 TMSVAEQ--NNTLNIYQNFFA-DLPPELGHDIKMRFRARVA---NVFHDLWLPARQLRSIEWMPN 175
            :..:.|:  :..:||:.::.. ||..:.|   :::..|:::   ..|.:.|...|.:..::|...
Mouse   246 STRIVERALSEQINIFFDYSGRDLEDKEG---EIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQ 307

  Fly   176 NSRQFMTQYTNHFAKGERLRPVTDEPFGGTNGFYVWDVK-NPLKPRITYDSKQQVSLAKICPKDE 239
            .....:..|.|:       .....||.|..   .||::| ....|...:..:..|..|.......
Mouse   308 YPELLVASYNNN-------EEAPHEPDGVA---LVWNMKYKKTTPEYVFHCQSAVMSATFAKFHP 362

  Fly   240 NNMVGGTGLGQVCLWGTFKG-GLPIRNCPLE-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYW 302
            |.:||||..||:.||..... ..|::..||. .:|......:..|.:::.....|.|.||.|..|
Mouse   363 NLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSW 427

  Fly   303 DTRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFV----GNRKGMT 363
            ....|..|...:    |...:||:  :..||.:.|.......|::||:.|.|:.    |::.|::
Mouse   428 SLDMLSHPQDSM----ELVHKQSK--AVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGIS 486

  Fly   364 PMETLLAHYQLFVGPVRSIN----------RNPFFVKNFLVTGDWRARIWSEEVKDSPSTMYFRK 418
            .|      ::...||:..|:          .:.|...:|    ||..::|:  .|::.....|..
Mouse   487 EM------FEGHQGPITGIHCHAAVGAVDFSHLFVTSSF----DWTVKLWT--TKNNKPLYSFED 539

  Fly   419 NAQILCGA-WSTGRCSLFVTGDINGVVDFWDLLLHHRKPIR--SVDFKVAIADLVFRPEGDLLAI 480
            |:..:... ||....:||...|..|.:|.|:|......|..  ||:...|:..:.:...|..:|:
Mouse   540 NSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAV 604

  Fly   481 GLKNGDTHIMTLDESMRQATGKEKALMAAMFEREIVRCKLLEARYDEVRLKRKTLQMAEEE 541
            |...|...|..:.|.:......|    .|.|.|.:.          |:...|..   ||||
Mouse   605 GDSEGQIVIYDVGEQIAVPRNDE----WARFGRTLA----------EINANRAD---AEEE 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 65/271 (24%)
WD40 211..>488 CDD:225201 69/296 (23%)
WD40 repeat 229..269 CDD:293791 13/40 (33%)
WD40 repeat 277..325 CDD:293791 10/47 (21%)
WD40 repeat 332..369 CDD:293791 11/40 (28%)
WD40 repeat 379..415 CDD:293791 7/45 (16%)
WD40 repeat 422..447 CDD:293791 7/25 (28%)
Dync1i2NP_001185801.1 Dynein_IC2 152..180 CDD:288403 9/31 (29%)
WD40 repeat 299..348 CDD:293791 10/58 (17%)
WD40 346..>616 CDD:225201 67/287 (23%)
WD40 repeat 356..394 CDD:293791 12/37 (32%)
WD40 397..>622 CDD:295369 54/242 (22%)
WD40 repeat 402..443 CDD:293791 10/44 (23%)
WD40 repeat 451..498 CDD:293791 13/52 (25%)
WD40 repeat 506..538 CDD:293791 6/37 (16%)
WD40 repeat 544..582 CDD:293791 10/37 (27%)
WD40 repeat 590..616 CDD:293791 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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