DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and Dync1i1

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_006505045.1 Gene:Dync1i1 / 13426 MGIID:107743 Length:645 Species:Mus musculus


Alignment Length:504 Identity:112/504 - (22%)
Similarity:187/504 - (37%) Gaps:57/504 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RFQDRNELMVSVHPSGRQRLKYIMANPSE-KSTQLSRQMALTVMETENVTLDQHGMYHYEGGWPK 83
            :.|..:||...:|..|..::..:...|.| .|.....|..|...::|....|:. |...:.|...
Mouse   134 QLQSDSELGRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEE-MVEPKIGHDS 197

  Fly    84 EVNFNDEEQTQRH---RKKVEREDS---WGEQVLSMIRTTMSVAEQ--NNTLNIYQNFFADLPPE 140
            |:...:::|..:.   |:..|.|..   ..|:.|.....|:.|.|:  ....:|:.::......|
Mouse   198 ELENQEKKQETKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEE 262

  Fly   141 LGHDIKMRFRARVANVFHD-LWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTDEPFGG 204
            ...|::..........|:| .|...|.:..::|........:..|:|:          .|.|...
Mouse   263 KDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYSNN----------EDAPHEP 317

  Fly   205 TNGFYVWDVK-NPLKPRITY---DSKQQVSLAKICPKDENNMVGGTGLGQVCLW-GTFKGGLPIR 264
            .....||::| ....|...:   .|...|..|:..|   |.:||||..||:.|| .......|::
Mouse   318 DGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHP---NLVVGGTYSGQIVLWDNRSHRRTPVQ 379

  Fly   265 NCPLE-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMD 328
            ..||. .:|......:..|.:::.....:.|.||.:..|....|..|.:.:.|.      .::..
Mouse   380 RTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELV------YNKSK 438

  Fly   329 SHGVTVLEFEYTIPVRFIIGSDMGHVFV----GNRKGMTPMETLLAHYQLFVGPVRSINRN---- 385
            ...||.:.|.......|::||:.|.|:.    |::.|:.  |....|.    |||..||.:    
Mouse   439 PVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIG--EVFEGHQ----GPVTGINCHMAVG 497

  Fly   386 PFFVKNFLVTG--DWRARIWSEEVKDSPSTMYFRKNAQILCGA-WSTGRCSLFVTGDINGVVDFW 447
            |....:..||.  ||..::|:  .|.:.....|..||..:... ||....:||...|..|.:|.|
Mouse   498 PIDFSHLFVTSSFDWTVKLWT--TKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLW 560

  Fly   448 DLLLHHRKPIRSVDFKVAIA--DLVFRPEGDLLAIGLKNGDTHIMTLDE 494
            :|......|..||..:.|.|  .:.:...|..:|:|...|...|..:.|
Mouse   561 NLNSDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGE 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 68/268 (25%)
WD40 211..>488 CDD:225201 73/295 (25%)
WD40 repeat 229..269 CDD:293791 14/40 (35%)
WD40 repeat 277..325 CDD:293791 8/47 (17%)
WD40 repeat 332..369 CDD:293791 11/40 (28%)
WD40 repeat 379..415 CDD:293791 10/41 (24%)
WD40 repeat 422..447 CDD:293791 7/25 (28%)
Dync1i1XP_006505045.1 Dynein_IC2 147..173 CDD:371592 5/25 (20%)
WD40 283..606 CDD:392136 82/349 (23%)
WD40 repeat 291..337 CDD:293791 9/55 (16%)
WD40 repeat 346..385 CDD:293791 15/41 (37%)
WD40 repeat 393..434 CDD:293791 8/46 (17%)
WD40 repeat 442..481 CDD:293791 11/40 (28%)
WD40 repeat 488..529 CDD:293791 9/42 (21%)
WD40 repeat 535..573 CDD:293791 10/37 (27%)
WD40 repeat 581..607 CDD:293791 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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