DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dnai2

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_031750209.1 Gene:dnai2 / 100495747 XenbaseID:XB-GENE-854694 Length:593 Species:Xenopus tropicalis


Alignment Length:633 Identity:215/633 - (33%)
Similarity:325/633 - (51%) Gaps:61/633 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FIYSRERRRFGRQCRFQDR-NELMVSVHPSGRQRLKYIMANPSEKSTQLSRQMALTVMETENVTL 69
            ::|:|:|..|||||.|.|| .||.|.:.|...|.|.:|..||.:.:.|.|.:|:...:.||...:
 Frog    11 YVYTRKRSEFGRQCNFSDRPAELHVDILPDPSQALNFIERNPCDVAIQCSHEMSEHEVNTERYEM 75

  Fly    70 DQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVEREDSWGEQVLSMIRTTMSVAE----QNNTLNIY 130
            :..|:.|.||||||::|..:.|||.|.|||||::|.:    ::.|....||.|    |||.:|||
 Frog    76 EARGINHVEGGWPKDINPQEMEQTIRFRKKVEKDDHY----IATISQLGSVMEHCIKQNNAINIY 136

  Fly   131 QNFFADLPPELGHDIKMRFRARVANVFHDLWLPARQLRSIEWMPNNSRQFMTQYT-NHFAKGERL 194
            :.:|.|.....|.|...  .|...|||.|.....|....:.|.|:.||:....|: ..|.:..: 
 Frog   137 EEYFEDTEELEGMDETP--SANTVNVFRDPNEIKRTATHLSWHPDGSRKLAVAYSCLDFQRAPK- 198

  Fly   195 RPVTDEPFGGTNGFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLWGTFKG 259
                |..:..    |:||::.|.||.:|......:...:..|||.:.:|||...||:..|.|.||
 Frog   199 ----DMSYES----YIWDIEIPNKPELTLKPVSPLVCLEYNPKDSHVLVGGCYNGQIAYWDTRKG 255

  Fly   260 GLPIRNCPLEVSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQ 324
            |.|:.:..:|.|||:....:.|:.||:.||.:|.|.||.|.:||.|.|..|.::|:|:...:|..
 Frog   256 GNPMESTVIEHSHRDPVYKVIWLQSKTGTECFSASTDGQILWWDIRKLSEPTEKLILDISKKENL 320

  Fly   325 SRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINRNPFFV 389
            .  ::.|...||||.|:|.:|::|::.|.:...|||..||.|.::..|....||:.||.||||:.
 Frog   321 D--NALGAVSLEFEPTLPTKFMVGTEQGMIVSCNRKAKTPPEKIVCTYGGHHGPIYSIQRNPFYP 383

  Fly   390 KNFLVTGDWRARIWSEEVKDSPSTMYFRKNAQILCGA-WSTGRCSLFVTGDINGVVDFWDLLLHH 453
            ||||..|||.||||||:.::| |.|:.:.:...|..| ||..|.::|:|..::|.:|.||.:...
 Frog   384 KNFLTVGDWTARIWSEDCRES-SIMWTKYHMSYLTDACWSPTRPTVFLTTKMDGTLDVWDYMYKQ 447

  Fly   454 RKPIRSVDFKVA---IADLVFRPEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREI 515
            ..|  |:..||:   :..:..:..|..:|.|.:.|.|.:|.|.:.:......|:.|.:||||||.
 Frog   448 NNP--SLSVKVSGEPLYSIRMQDNGRFVACGSQMGVTTLMELSKGLYTLQRNERNLASAMFERET 510

  Fly   516 VRCKLLEARYDEVRLKRKTLQMAEEERVRKQQQLAPTLELDPDNPDQFVMMIEGDEEFRTAITEF 580
            .|.|:||||:.|:|||.::             :..|..|:..:.|.:     :.:|....|..:|
 Frog   511 KREKILEARHREMRLKERS-------------KAEPGEEVKEEKPAE-----DMNEIIANAEKDF 557

  Fly   581 QDIILSVERKRSKRQVIMERTVFEEWNPADEKLQGEPVVYTKPERKVQ 628
            .:|| ..|.||.::|        |...|.||..:.|    ...|:.||
 Frog   558 FEII-EAELKRKEQQ--------ERKQPEDEHQEKE----VSEEKIVQ 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 96/252 (38%)
WD40 repeat 229..269 CDD:293791 14/39 (36%)
WD40 repeat 277..325 CDD:293791 18/47 (38%)
WD40 repeat 332..369 CDD:293791 15/36 (42%)
WD40 repeat 379..415 CDD:293791 21/35 (60%)
WD40 repeat 422..447 CDD:293791 9/25 (36%)
dnai2XP_031750209.1 WD40 repeat 105..141 CDD:293791 14/39 (36%)
WD40 repeat 172..221 CDD:293791 14/57 (25%)
WD40 223..477 CDD:475233 94/258 (36%)
WD40 repeat 226..265 CDD:293791 14/38 (37%)
WD40 repeat 273..314 CDD:293791 17/40 (43%)
WD40 repeat 326..367 CDD:293791 15/40 (38%)
WD40 repeat 373..409 CDD:293791 22/36 (61%)
WD40 repeat 416..441 CDD:293791 9/24 (38%)
tolA_full <509..>593 CDD:274303 31/115 (27%)

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