DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dnai2

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:XP_031750209.1 Gene:dnai2 / 100495747 XenbaseID:XB-GENE-854694 Length:593 Species:Xenopus tropicalis


Alignment Length:633 Identity:215/633 - (33%)
Similarity:325/633 - (51%) Gaps:61/633 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FIYSRERRRFGRQCRFQDR-NELMVSVHPSGRQRLKYIMANPSEKSTQLSRQMALTVMETENVTL 69
            ::|:|:|..|||||.|.|| .||.|.:.|...|.|.:|..||.:.:.|.|.:|:...:.||...:
 Frog    11 YVYTRKRSEFGRQCNFSDRPAELHVDILPDPSQALNFIERNPCDVAIQCSHEMSEHEVNTERYEM 75

  Fly    70 DQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVEREDSWGEQVLSMIRTTMSVAE----QNNTLNIY 130
            :..|:.|.||||||::|..:.|||.|.|||||::|.:    ::.|....||.|    |||.:|||
 Frog    76 EARGINHVEGGWPKDINPQEMEQTIRFRKKVEKDDHY----IATISQLGSVMEHCIKQNNAINIY 136

  Fly   131 QNFFADLPPELGHDIKMRFRARVANVFHDLWLPARQLRSIEWMPNNSRQFMTQYT-NHFAKGERL 194
            :.:|.|.....|.|...  .|...|||.|.....|....:.|.|:.||:....|: ..|.:..: 
 Frog   137 EEYFEDTEELEGMDETP--SANTVNVFRDPNEIKRTATHLSWHPDGSRKLAVAYSCLDFQRAPK- 198

  Fly   195 RPVTDEPFGGTNGFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLWGTFKG 259
                |..:..    |:||::.|.||.:|......:...:..|||.:.:|||...||:..|.|.||
 Frog   199 ----DMSYES----YIWDIEIPNKPELTLKPVSPLVCLEYNPKDSHVLVGGCYNGQIAYWDTRKG 255

  Fly   260 GLPIRNCPLEVSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQ 324
            |.|:.:..:|.|||:....:.|:.||:.||.:|.|.||.|.:||.|.|..|.::|:|:...:|..
 Frog   256 GNPMESTVIEHSHRDPVYKVIWLQSKTGTECFSASTDGQILWWDIRKLSEPTEKLILDISKKENL 320

  Fly   325 SRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINRNPFFV 389
            .  ::.|...||||.|:|.:|::|::.|.:...|||..||.|.::..|....||:.||.||||:.
 Frog   321 D--NALGAVSLEFEPTLPTKFMVGTEQGMIVSCNRKAKTPPEKIVCTYGGHHGPIYSIQRNPFYP 383

  Fly   390 KNFLVTGDWRARIWSEEVKDSPSTMYFRKNAQILCGA-WSTGRCSLFVTGDINGVVDFWDLLLHH 453
            ||||..|||.||||||:.::| |.|:.:.:...|..| ||..|.::|:|..::|.:|.||.:...
 Frog   384 KNFLTVGDWTARIWSEDCRES-SIMWTKYHMSYLTDACWSPTRPTVFLTTKMDGTLDVWDYMYKQ 447

  Fly   454 RKPIRSVDFKVA---IADLVFRPEGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREI 515
            ..|  |:..||:   :..:..:..|..:|.|.:.|.|.:|.|.:.:......|:.|.:||||||.
 Frog   448 NNP--SLSVKVSGEPLYSIRMQDNGRFVACGSQMGVTTLMELSKGLYTLQRNERNLASAMFERET 510

  Fly   516 VRCKLLEARYDEVRLKRKTLQMAEEERVRKQQQLAPTLELDPDNPDQFVMMIEGDEEFRTAITEF 580
            .|.|:||||:.|:|||.::             :..|..|:..:.|.:     :.:|....|..:|
 Frog   511 KREKILEARHREMRLKERS-------------KAEPGEEVKEEKPAE-----DMNEIIANAEKDF 557

  Fly   581 QDIILSVERKRSKRQVIMERTVFEEWNPADEKLQGEPVVYTKPERKVQ 628
            .:|| ..|.||.::|        |...|.||..:.|    ...|:.||
 Frog   558 FEII-EAELKRKEQQ--------ERKQPEDEHQEKE----VSEEKIVQ 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 96/252 (38%)
WD40 211..>488 CDD:225201 102/280 (36%)
WD40 repeat 229..269 CDD:293791 14/39 (36%)
WD40 repeat 277..325 CDD:293791 18/47 (38%)
WD40 repeat 332..369 CDD:293791 15/36 (42%)
WD40 repeat 379..415 CDD:293791 21/35 (60%)
WD40 repeat 422..447 CDD:293791 9/25 (36%)
dnai2XP_031750209.1 WD40 repeat 105..141 CDD:293791 14/39 (36%)
WD40 <172..495 CDD:225201 113/336 (34%)
WD40 repeat 172..221 CDD:293791 14/57 (25%)
WD40 repeat 226..265 CDD:293791 14/38 (37%)
WD40 repeat 273..314 CDD:293791 17/40 (43%)
WD40 repeat 326..367 CDD:293791 15/40 (38%)
WD40 repeat 373..409 CDD:293791 22/36 (61%)
WD40 repeat 416..441 CDD:293791 9/24 (38%)
tolA_full <509..>593 CDD:274303 31/115 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217312at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12442
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2212
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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