DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dync1i1

DIOPT Version :9

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001106382.1 Gene:dync1i1 / 100127187 XenbaseID:XB-GENE-490874 Length:627 Species:Xenopus tropicalis


Alignment Length:532 Identity:121/532 - (22%)
Similarity:198/532 - (37%) Gaps:82/532 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SRERRRFGRQCRFQDRNELMVSVHPS---GRQRLKYIMANPSEKSTQL------------SRQMA 58
            |.|....||..:: |.:..::.:|..   ||:.:|..::    |.||:            ..|..
 Frog    97 SVEGTLMGRTLQW-DTDPSVLQLHSDSELGRRLIKLGVS----KVTQVDFLPREVVSYSKETQTP 156

  Fly    59 LTVMETENVTLDQHGMYHYEGGWPKEVNFNDEEQTQRH---RKKVERED---SWGEQVLSMIRTT 117
            :|..:||....|:. |...:.....|....:|:|..|.   |:..|.|.   :..|:.|.....|
 Frog   157 VTTHQTEEEEEDEE-MVDLKTEHDSEFENQEEKQDSREVPPRELTEEEKQQVTHSEEFLIFFDRT 220

  Fly   118 MSV-----AEQNNTLNIYQNFFADLPPELGHDIKMRFRARVANVFHD-LWLPARQLRSIEWMPNN 176
            :.|     ||.:|....|..  .||..:.| ||:..........|:| .|...|.:..::|....
 Frog   221 IRVIERALAEDSNIFFDYSG--RDLEDKEG-DIQAGANLSFNRQFYDEHWSKHRVVTCLDWSLQY 282

  Fly   177 SRQFMTQYTNHFAKGERLRPVTDEPFGGTNGFYVWDVK-NPLKPRITY---DSKQQVSLAKICPK 237
            ....:..|.|:          .|.|........||::| ....|...:   .|...|..|:..| 
 Frog   283 PELMVASYNNN----------EDAPHEPDGVALVWNMKFRKTTPEYIFHCQSSVMSVCFARFHP- 336

  Fly   238 DENNMVGGTGLGQVCLW-GTFKGGLPIRNCPLE-VSHRETTSALCWVHSKSNTEFYSGSLDGSIK 300
              |.::|||..||:.|| .......|::..||. .:|......:..|.:::.....:.|.||.:.
 Frog   337 --NLVIGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPIYCVNVVGTQNAHNLITVSTDGKLC 399

  Fly   301 YWDTRDLKMPMQELLLEPEPQERQSRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFV----GNRKG 361
            .|....|..|.:.:.|.      .::.....||.:.|.......|::||:.|.|:.    |::.|
 Frog   400 SWSLDMLSAPQESMELV------YNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAG 458

  Fly   362 MTPMETLLAHYQLFVGPVRSINRN----PFFVKNFLVTG--DWRARIWSEEVKDSPSTMYFRKNA 420
            ::  |....|.    |||..||.:    |....:..:|.  ||..::|:  .|.:.....|..||
 Frog   459 IS--EVFEGHQ----GPVTGINCHNAVGPIDFSHLFLTSSFDWTVKLWT--TKHNKPLYSFEDNA 515

  Fly   421 QILCG-AWSTGRCSLFVTGDINGVVDFWDLLLHHRKPIRS--VDFKVAIADLVFRPEGDLLAIGL 482
            ..:|. .||....:||...|..|.:|.|:|......|..|  |:...|:..:.:...|..:|:|.
 Frog   516 DYVCDVTWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASTAVEGASALNRVRWAQSGKEVAVGD 580

  Fly   483 KNGDTHIMTLDE 494
            ..|...|..:.|
 Frog   581 SEGRVWIYDVGE 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:295369 67/270 (25%)
WD40 211..>488 CDD:225201 71/295 (24%)
WD40 repeat 229..269 CDD:293791 13/40 (33%)
WD40 repeat 277..325 CDD:293791 8/47 (17%)
WD40 repeat 332..369 CDD:293791 11/40 (28%)
WD40 repeat 379..415 CDD:293791 9/41 (22%)
WD40 repeat 422..447 CDD:293791 8/25 (32%)
dync1i1NP_001106382.1 Dynein_IC2 129..156 CDD:288403 5/30 (17%)
WD40 180..598 CDD:225201 103/443 (23%)
BALF1 <221..>276 CDD:115513 14/57 (25%)
WD40 266..589 CDD:295369 80/349 (23%)
WD40 repeat 274..319 CDD:293791 9/54 (17%)
WD40 repeat 329..368 CDD:293791 14/41 (34%)
WD40 repeat 376..419 CDD:293791 8/48 (17%)
WD40 repeat 425..464 CDD:293791 11/40 (28%)
WD40 repeat 480..512 CDD:293791 6/33 (18%)
WD40 repeat 518..556 CDD:293791 11/37 (30%)
WD40 repeat 564..590 CDD:293791 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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