| Sequence 1: | NP_572434.1 | Gene: | Upf2 / 31724 | FlyBaseID: | FBgn0029992 | Length: | 1241 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038951851.1 | Gene: | Upf2 / 361271 | RGDID: | 1309178 | Length: | 1269 | Species: | Rattus norvegicus |
| Alignment Length: | 1322 | Identity: | 476/1322 - (36%) |
|---|---|---|---|
| Similarity: | 715/1322 - (54%) | Gaps: | 192/1322 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 TTDSEVS-TPPSSRKDLADGVAEGDNDNDIDTGDTDANADEDV---------------------- 49
Fly 50 -----DAAAAIALEAEEREELQQFISELREKIESKRQLRL--QNSTIELPGEEYFAKLDSNLKKN 107
Fly 108 TAFVKKLKLFTATQLDGLLREISALNLSKYISEICAALVEAKLKMTDVPAVVTLASRLHCTYADF 172
Fly 173 DVHFLEAWQKALNIKATEKIGNPSKLRVDLRLFAELVSSGVIQMKPGLAQLGVVLVHLIALDKDD 237
Fly 238 HSNFSIILSFCRHCGEEYAGLVPQKMQQLATKYGVEVPKSDFLTADKQLNLRTMLKGYFKALCKH 302
Fly 303 VLAEQAELMNMTKNIRRTMECKGEISTEKREKCELMQAGFDKLLASAQSLSELLGEPLPELAKES 367
Fly 368 ---EGCNPGTVIDNMLDSASFGVLD----PWGDEETRAFYTDLPDLRQFLP-----------NFS 414
Fly 415 APKVDLETLEEPSELTEEAIDANLDAE---MDLDDPPSTTSDTTPENPIEEQPTTPVAAAEDLKP 476
Fly 477 QKMGNALMELGRQQQQQSQLNQNPIQIQNQMRQQFDGFLVNLFNCVNKELIDSAAIEFLLNFNTK 541
Fly 542 HQRKKLTRTIFSVQRTRLDILPYLSRFVAIVHMCNTDVATDLAELLRKEFKWHIHKKNQLNIETK 606
Fly 607 LKIVRFIGELVKFGLFKKFDALGCLKMLLRDFQHHQIEMACAFVEVTGVYLYNCRDARLLMNVFL 671
Fly 672 DQMLRLKTATAMDSRHAAQIESVYYLVKPPESSKREPMVRPAMHEYIRYLIFEELCKQNVDRCIK 736
Fly 737 MLRRIDWQDPETNCYAIKCLSKAYLLRFQLIRCLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLE 801
Fly 802 IHSPRMAQRRIAMAKYLGEMYNYKLVESTNILNTLYSIISLGVSNDQNVVSPLDPPDSLFRLKLA 866
Fly 867 CMLLDTCAPYFTSQATRKKLDYFLVFFQHYYWFKKSHPVFSKTENTSDLFPILMDHTYRDCLLNV 931
Fly 932 RPKLKIYKSLEQAKAAIDHLQEKLYPQLKTTNNAQDPSLGT----ISEISEIDEGG--TDEDSGS 990
Fly 991 S---NDQRERQVS-----GQEQDQSN-DW-----TENEAEPP----------LPPLPPPEKSKED 1031
Fly 1032 LEFEQLYEKMTTDSYQERLKEPIKATAKDIPVPMMARLQKKSYDQITGAQTIGPGINNMSQISKS 1096
Fly 1097 VPNQDGTPGSPGADSPDGNGKSGGGVGGSDVGAAGAAGASGATSVPFVLMVRGHKGGKQQFKSFV 1161
Fly 1162 APSDSHLATNLKRQEQMIREEKEKVKRLTLNITERIEEEDYQESLMPPQHRNFTQSYYQKP---- 1222
Fly 1223 ----NKHKFKHQKGAPDADLIF 1240 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Upf2 | NP_572434.1 | MIF4G | 104..300 | CDD:214713 | 88/195 (45%) |
| MIF4G | 518..701 | CDD:214713 | 95/182 (52%) | ||
| MIF4G | 716..934 | CDD:280935 | 94/217 (43%) | ||
| Upf2 | 980..1192 | CDD:281974 | 63/237 (27%) | ||
| Upf2 | XP_038951851.1 | MIF4G | 167..362 | CDD:214713 | 81/194 (42%) |
| DUF1451 | 357..>420 | CDD:418628 | 22/65 (34%) | ||
| MIF4G | 569..756 | CDD:214713 | 92/186 (49%) | ||
| MIF4G | 774..984 | CDD:397130 | 94/209 (45%) | ||
| Upf2 | 1091..1215 | CDD:397938 | 30/123 (24%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 202 | 1.000 | Domainoid score | I2902 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H6101 | |
| Inparanoid | 1 | 1.050 | 724 | 1.000 | Inparanoid score | I595 |
| OMA | 1 | 1.010 | - | - | QHG55567 | |
| OrthoDB | 1 | 1.010 | - | - | D653534at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0005166 | |
| OrthoInspector | 1 | 1.000 | - | - | oto95726 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103377 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12839 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X3685 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.980 | |||||