DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and RSC2

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_013461.1 Gene:RSC2 / 851071 SGDID:S000004349 Length:889 Species:Saccharomyces cerevisiae


Alignment Length:569 Identity:94/569 - (16%)
Similarity:158/569 - (27%) Gaps:245/569 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEK 131
            |.:.|||:.:||.|:...|:|||:.  :|..|::.:.|...:..|...||.....:...|..|||
Yeast    49 KKDYPDYYAVIKNPVSFNTLKKRIP--HYTDAQQFMNDVVQIPWNAKTYNTRDSGIYKYALVLEK 111

  Fly   132 VFLQKIESMPKEEL------ELEPVTAKGG------KKKQRAPATPKSSSGGAGASTGSGTSSAA 184
            .....|....||:.      :|.|:..:.|      |.:::|....::::..|.:|:...::.||
Yeast   112 YLKDTIYPNLKEKYPQLVYPDLGPLPDEPGYEEFQQKLREKAEEVARANAARAESSSSMNSTEAA 176

  Fly   185 VTSGPGSGSTKVSVAASSAQQSGLQGATGAGGGSSSTPGTQPGSG----AGGAIAARPVSAMGGT 245
                .....|:.||.                  ..|.|||...:.    |.......|..|    
Yeast   177 ----RRLRKTRTSVK------------------RESEPGTDTNNDEDYEATDMDIDNPKDA---- 215

  Fly   246 VSSTAGGAPSI--PPISTMPPHT-VPGSTNTTTTAMAGGVGGPGAAGANPNAAALMASLLNAGQT 307
                  ..|.:  .|:..:.|:| .|...|.:||        |..:|.                 
Yeast   216 ------DFPDLIRKPLININPYTRKPLRDNRSTT--------PSHSGT----------------- 249

  Fly   308 GAYPGAPGQTAVNSSSLLDGSTAAVAAAAAAAAAAAAAAGGAAGAAGGAGTIPAVAVNAANAVQA 372
             ..|..|....|:.:.:..|.                                            
Yeast   250 -PQPLGPRHRQVSRTQVKRGR-------------------------------------------- 269

  Fly   373 YVNAGVSVGVDAVIPPQQPAKIKKGVKRKADTTTPTANAFESPYTQMDSKSAKIATRRESNRQVI 437
                          ||                      ..:.||.|......|:.     .::|:
Yeast   270 --------------PP----------------------IIDLPYIQRMKNVMKVL-----KKEVL 293

  Fly   438 GKKGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEILKELFSKKHSGYAWP 502
            .                           :|:.:....|:|.|..:..|                 
Yeast   294 D---------------------------SGIGLTDLFERLPDRHRDAN----------------- 314

  Fly   503 FYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVV 567
                          |:.:|..|:.|..:.:|:..|.||:..||..|..|:.||....:..|.:.:
Yeast   315 --------------YYIMIANPISLQDINKKVKTRRYKTFQEFQNDFNLMLTNFRISHRGDPESI 365

  Fly   568 AMGRKLQDVF-------------------EMRYANIP-DEPVANAAHHH 596
            .:...|:..|                   |:||   | ||.:.|...:|
Yeast   366 KISNILEKTFTSLARFELSKPDRSFIPEGELRY---PLDEVIVNNISYH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929 22/72 (31%)
COG5076 387..>593 CDD:227408 36/225 (16%)
Bromo_Brdt_II_like 481..581 CDD:99930 19/118 (16%)
BET 951..1015 CDD:293640
BRD4_CDT <2026..2046 CDD:293710
RSC2NP_013461.1 Bromo_Rsc1_2_I 17..121 CDD:99952 22/73 (30%)
COG5076 123..503 CDD:227408 71/493 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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