DRSC/TRiP Functional Genomics Resources

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Protein Alignment fs(1)h and GTE3

DIOPT Version :9

Sequence 1:NP_001259321.1 Gene:fs(1)h / 31722 FlyBaseID:FBgn0004656 Length:2046 Species:Drosophila melanogaster
Sequence 2:NP_177458.1 Gene:GTE3 / 843646 AraportID:AT1G73150 Length:461 Species:Arabidopsis thaliana


Alignment Length:687 Identity:150/687 - (21%)
Similarity:211/687 - (30%) Gaps:307/687 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 KIATRRESNRQVIGK-KGSGYNMSPLGVSGVPGLGGLVAGGVAGVAVAKNKEKLSDALKSCNEIL 488
            |:....|..|.:|.: :..|.|.:|:....:....|...|||.|.|..|...::   |||||.:|
plant    66 KLQAELEEVRSLIKRLEPQGNNFAPVPNKKLKTANGGKKGGVHGAAADKGTVQI---LKSCNNLL 127

  Fly   489 KELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIF 553
            .:|...| ||  |.|..|||...|||||||:|||:||||||||.::....|||..|||.||||.|
plant   128 TKLMKHK-SG--WIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTF 189

  Fly   554 TNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEPVANAAHHHGHGHGHGHGHGHGHGHGHGHGH 618
            .|...|||..|||..|...|.::||.::..:                                  
plant   190 NNAMLYNPVGHDVYHMAEILLNLFEEKWVPL---------------------------------- 220

  Fly   619 GHGYGGSSSLKHDASDSSSEDSSDTENESNSDEERSARLKMLESKLLGLQEEIRKLSEEASAKKK 683
                                   :|:.|                .|:..|:.:|.:...|..   
plant   221 -----------------------ETQYE----------------LLIRKQQPVRDIDFHAPV--- 243

  Fly   684 AKKKLKEKKKSIGGGSGSGSASHHCHATGGGANAGGAGGPGSGGHGSVSVPGGVGSLGPGGAGGA 748
                              .:.:|:..|                    :.:|....||.|......
plant   244 ------------------STNTHNVEA--------------------LPLPAPTPSLSPPPPPKV 270

  Fly   749 NLNALLGGSLVGHGGAAVAGGVPNVGALHSQVHDVAMAFSQMAGGGAAAGAGFGAGVTAAGASSG 813
            ..|..|..:                   .|..:.|..|...:.                      
plant   271 VENRTLERA-------------------ESMTNPVKPAVLPVV---------------------- 294

  Fly   814 GKAGTLAGALAAGAAAGAGGTTAGSGSSKGAKSKGGRGAKGSGAGGVGASNNAAAGNAAGGAAGA 878
                                                                             
plant   295 ----------------------------------------------------------------- 294

  Fly   879 AAGAGSVGGVGGAGAAGGGNASKRAKGSSSAGAGGGVGGANASAGGAGARGSSKKKPSQVMNFDS 943
                                                                    |.:::    
plant   295 --------------------------------------------------------PEKLV---- 299

  Fly   944 EEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQNREPSLRDSNPDEIEIDFETLKPSTLRE 1008
            ||....:.:::|||||||.|:..||.|||..||.||:.|.|.|...: ||||:|.::|...||.|
plant   300 EEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQD-DEIELDIDSLDLETLWE 363

  Fly  1009 LESYVASCLRKKTHKKPSGKSKDEQMAEKKQELEKRLQD-------VTGQLGASKKTAKKDESAS 1066
            |..:|..      :|:...|.|:||..:.:::.|.....       ||| |.:||.|.....:::
plant   364 LFRFVTE------YKESLSKKKEEQGLDSERDAESFHNSVHESNTLVTG-LESSKVTELGHVAST 421

  Fly  1067 SKVEAVQPANPVSSSSSSSDSSSSSSSDSSSSDSSDS 1103
            .:.|.     .|..||||:.|||.|.|.||.|||..|
plant   422 VRQEV-----NVGGSSSSNSSSSGSGSGSSGSDSDSS 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fs(1)hNP_001259321.1 Bromo_Brdt_I_like 34..140 CDD:99929
COG5076 387..>593 CDD:227408 69/168 (41%)
Bromo_Brdt_II_like 481..581 CDD:99930 55/99 (56%)
BET 951..1015 CDD:293640 31/63 (49%)
BRD4_CDT <2026..2046 CDD:293710
GTE3NP_177458.1 Bromo_plant1 120..217 CDD:99938 55/99 (56%)
BET 308..370 CDD:407211 31/62 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I2516
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 1 1.000 - - mtm8402
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.770

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